Stem-loop sequence dme-mir-927

Accession MI0005843
Description Drosophila melanogaster miR-927 stem-loop
Gene family MIPF0000452; mir-927
Stem-loop 
---   uug u    a            cu       a   uggcau 
   ugg   c guag guuuuagaauuc  acgcuuu ccg      a
   |||   | |||| ||||||||||||  ||||||| |||       
   acc   g cauc caaagucuuagg  ugcgaaa ggc      c
auu   -ua c    c            uu       c   uuaaag
Get sequence
Deep sequencing
14072 reads, 37 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
X: 15859980-15860071 [-]
sense
FBtr0299534 ; mmd-RB; intron 2
FBtr0299536 ; mmd-RC; intron 2
FBtr0299535 ; mmd-RD; intron 2
FBtr0299534 ; mmd-RB; intron 2
FBtr0307540 ; mmd-RE; intron 2
FBtr0299535 ; mmd-RD; intron 2
FBtr0299534 ; mmd-RB; intron 2
FBtr0307540 ; mmd-RE; intron 2
FBtr0299535 ; mmd-RD; intron 2
FBtr0307541 ; mmd-RF; intron 3
FBtr0307542 ; mmd-RG; intron 3
FBtr0307541 ; mmd-RF; intron 3
FBtr0307542 ; mmd-RG; intron 3

Mature sequence dme-miR-927-5p

Accession MIMAT0005501
Previous IDs dme-miR-927
Sequence

16 -  

uuuagaauuccuacgcuuuacc

 - 37

Get sequence
Deep sequencing 13400 reads, 35 experiments
Evidence experimental; 454 [1], Solexa [2]
Predicted targets

Mature sequence dme-miR-927-3p

Accession MIMAT0020882
Sequence

56 -  

caaagcguuuggauucugaaac

 - 77

Get sequence
Deep sequencing 620 reads, 30 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).
2
PMID:17989255 "Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes" Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M Genome Res. 17:1865-1879(2007).