Stem-loop sequence dme-mir-983-1

Accession MI0005840
Description Drosophila melanogaster miR-983-1 stem-loop
Gene family MIPF0000450; mir-983
Stem-loop 
-uaua            a     a   uu gaa       uuuuc 
     uugcaauaauua auaau cgu  c   cuaauga     a
     |||||||||||| ||||| |||  |   |||||||      
     aauguuguugau uauua gca  g   gauuacu     g
uuaca            c     c   uu aug       uacuu
Get sequence
Deep sequencing
9003 reads, 44 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
X: 4262342-4262432 [-]
antisense
FBtr0070652 ; CG3626-RA; intron 1
FBtr0070652 ; CG3626-RA; intron 1
FBtr0070652 ; CG3626-RA; intron 1
Clustered miRNAs
< 10kb from dme-mir-983-1
dme-mir-984 X: 4262679-4262768 [-]
dme-mir-983-2 X: 4262516-4262614 [-]
dme-mir-983-1 X: 4262342-4262432 [-]
dme-mir-303 X: 4260212-4260281 [-]
dme-mir-982 X: 4259839-4259931 [-]

Mature sequence dme-miR-983-5p

Accession MIMAT0005499
Previous IDs dme-miR-983
Sequence

18 -  

auaauacguuucgaacuaauga

 - 39

Get sequence
Deep sequencing 3608 reads, 38 experiments
Evidence experimental; 454 [1]
Predicted targets

Mature sequence dme-miR-983-3p

Accession MIMAT0020880
Sequence

54 -  

auuagguaguuacgcauuaucu

 - 75

Get sequence
Deep sequencing 14388 reads, 42 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).