Stem-loop sequence dme-mir-975

Accession MI0005832
Description Drosophila melanogaster miR-975 stem-loop
Gene family MIPF0001038; mir-975
Stem-loop 
--uu          u u     -   u        c     ---   u 
    gaauuuuuga u uaaac acu ccuacauc uguau   gug u
    |||||||||| | ||||| ||| |||||||| |||||   ||| u
    uuuagagacu a guuug uga ggguguag acaug   uac u
acac          c c     c   -        -     gcc   g
Get sequence
Deep sequencing
3334 reads, 32 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
X: 19452786-19452876 [+]
intergenic
Clustered miRNAs
< 10kb from dme-mir-975
dme-mir-972 X: 19445185-19445275 [+]
dme-mir-973 X: 19445561-19445661 [+]
dme-mir-974 X: 19445711-19445811 [+]
dme-mir-2499 X: 19451041-19451136 [+]
dme-mir-4966 X: 19452403-19452529 [+]
dme-mir-975 X: 19452786-19452876 [+]
dme-mir-976 X: 19452928-19453024 [+]
dme-mir-977 X: 19453055-19453153 [+]
dme-mir-978 X: 19455269-19455360 [+]
dme-mir-979 X: 19455870-19455964 [+]

Mature sequence dme-miR-975-5p

Accession MIMAT0005491
Previous IDs dme-miR-975
Sequence

16 -  

uaaacacuuccuacauccuguau

 - 38

Get sequence
Deep sequencing 3275 reads, 30 experiments
Evidence experimental; 454 [1]
Predicted targets

Mature sequence dme-miR-975-3p

Accession MIMAT0020872
Sequence

55 -  

acagaugugggagucguuugca

 - 76

Get sequence
Deep sequencing 50 reads, 10 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).