Stem-loop sequence dme-mir-966

Accession MI0005822
Description Drosophila melanogaster miR-966 stem-loop
Stem-loop 
---aa  -  a     u    u       g     u     ugugg 
     cc ug uccgc gcug ggguugu ggcug guggc     u
     || || ||||| |||| ||||||| ||||| |||||      
     gg ac gggug cgac cccaaua uugac cgccg     a
accca  c  -     -    c       g     -     uggau
Get sequence
Deep sequencing
559 reads, 41 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
2L: 6045627-6045713 [-]
sense
FBtr0079220 ; ade2-RB; intron 1
FBtr0079219 ; ade2-RA; intron 1
FBtr0079220 ; ade2-RB; intron 1
FBtr0079219 ; ade2-RA; intron 1
FBtr0079220 ; ade2-RB; intron 1
FBtr0079219 ; ade2-RA; intron 1

Mature sequence dme-miR-966-5p

Accession MIMAT0005481
Previous IDs dme-miR-966
Sequence

16 -  

uguggguugugggcugugugg

 - 36

Get sequence
Deep sequencing 452 reads, 37 experiments
Evidence experimental; 454 [1]
Predicted targets

Mature sequence dme-miR-966-3p

Accession MIMAT0020862
Sequence

51 -  

ccgccaguugauaacccccagc

 - 72

Get sequence
Deep sequencing 106 reads, 30 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).