Stem-loop sequence dme-mir-193

Accession MI0005809
Description Drosophila melanogaster miR-193 stem-loop
Gene family MIPF0000082; mir-193
Stem-loop 
ugug   c         g         uu   au   c  -----------u   u   a 
    ugc cuuauuaug uugggauuu  uag  cag ag            uau gcu u
    ||| ||||||||| |||||||||  |||  ||| ||            ||| |||  
    aug gaguaauac aacccugaa  auc  guc uc            aua cga a
--aa   a         -         uc   cg   a  uucuaaauauuu   c   u
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Deep sequencing
31878 reads, 39 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
3L: 21567114-21567221 [+]
intergenic

Mature sequence dme-miR-193-5p

Accession MIMAT0020849
Sequence

19 -  

uugggauuuuuuagaucagcag

 - 40

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Deep sequencing 3477 reads, 24 experiments
Evidence not experimental
Predicted targets

Mature sequence dme-miR-193-3p

Accession MIMAT0005468
Previous IDs dme-miR-193
Sequence

73 -  

uacuggccuacuaagucccaac

 - 94

Get sequence
Deep sequencing 28343 reads, 35 experiments
Evidence experimental; 454 [1-2], Solexa [2]
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).
2
PMID:17989255 "Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes" Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M Genome Res. 17:1865-1879(2007).