Stem-loop sequence hsa-mir-941-3

Accession MI0005765
Symbol HGNC:MIR941-3
Description Homo sapiens miR-941-3 stem-loop
Gene family MIPF0000387; mir-941
Stem-loop 
cacggaaga  a   --a     -  g  u          c  g    c   aca   -  a g 
         gg cgc   cccgg cu ug gcacaugugc ca ggcc ggg   gcg cc c g
         || |||   ||||| || || |||||||||| || |||| |||   ||| || |  
         cc gcg   gggcc gg ac cguguacacg gu ucgg ccc   cgc gg g a
-----ggua  -   aca     c  g  c          u  g    -   --a   a  a a
Get sequence
Deep sequencing
1060 reads, 24 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr20: 62551085-62551201 [+]
sense
OTTHUMT00000080244 ; DNAJC5-001; intron 1
OTTHUMT00000080245 ; DNAJC5-002; intron 1
OTTHUMT00000080244 ; DNAJC5-001; intron 1
OTTHUMT00000080245 ; DNAJC5-002; intron 1
OTTHUMT00000080244 ; DNAJC5-001; intron 1
OTTHUMT00000080245 ; DNAJC5-002; intron 1
ENST00000360864 ; DNAJC5-001; intron 1
ENST00000470551 ; DNAJC5-002; intron 1
ENST00000369911 ; DNAJC5-201; intron 1
ENST00000360864 ; DNAJC5-001; intron 1
ENST00000470551 ; DNAJC5-002; intron 1
ENST00000369911 ; DNAJC5-201; intron 1
ENST00000360864 ; DNAJC5-001; intron 1
ENST00000470551 ; DNAJC5-002; intron 1
ENST00000369911 ; DNAJC5-201; intron 1
Clustered miRNAs
< 10kb from hsa-mir-941-3
hsa-mir-941-1 chr20: 62550778-62550894 [+]
hsa-mir-941-3 chr20: 62551085-62551201 [+]
Database links

Mature sequence hsa-miR-941

Accession MIMAT0004984
Sequence

71 -  

cacccggcugugugcacaugugc

 - 93

Get sequence
Deep sequencing 2810 reads, 18 experiments
Evidence experimental; cloned [1], SOLiD [2]
Predicted targets

References

1
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).
2
PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).