Stem-loop sequence hsa-mir-509-3

Accession MI0005717
Symbol HGNC:MIR509-3
Description Homo sapiens miR-509-3 stem-loop
Gene family MIPF0000130; mir-506
Stem-loop 
-- ug    c   - ug        g       --g  u 
  g  guac cua c  cagacgug caaucau   ua a
  |  |||| ||| |  |||||||| |||||||   ||  
  c  caug gau g  gucugcau guuagua   au a
ua gu    a   g gu        g       aaa  u
Get sequence
Deep sequencing
43737 reads, 16 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chrX: 146341170-146341244 [-]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-509-3
hsa-mir-509-1 chrX: 146342050-146342143 [-]
hsa-mir-509-3 chrX: 146341170-146341244 [-]
hsa-mir-509-2 chrX: 146340278-146340368 [-]
hsa-mir-514b chrX: 146331669-146331748 [-]
Database links

Mature sequence hsa-miR-509-3-5p

Accession MIMAT0004975
Sequence

10 -  

uacugcagacguggcaaucaug

 - 31

Get sequence
Deep sequencing 30019 reads, 15 experiments
Evidence experimental; cloned [3]
Predicted targets

Mature sequence hsa-miR-509-3p

Accession MIMAT0002881
Previous IDs hsa-miR-509
Sequence

44 -  

ugauugguacgucuguggguag

 - 65

Get sequence
Deep sequencing 40943 reads, 13 experiments
Evidence experimental; array-cloned [1], cloned [2-3]
Validated targets
Predicted targets

References

1
PMID:15965474 "Identification of hundreds of conserved and nonconserved human microRNAs" Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z Nat Genet. 37:766-770(2005).
2
PMID:17573847 "Analysis of gene expression in normal and neoplastic human testis: new roles of RNA" Novotny GW, Nielsen JE, Sonne SB, Skakkebaek NE, Rajpert-De Meyts E, Leffers H Int J Androl. 30:316-326(2007).
3
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).