Stem-loop sequence cre-MIR916

Accession MI0005711
Description Chlamydomonas reinhardtii miR916 stem-loop
Stem-loop 
       c                     g                         u        c                                                                                                  c  cc      c   ac    acgagaggccuuaaggauguaaggccuauaugccuggucggacgggcggucagacgacauuuggggguucgggggcgcucggggcuauguauguuguggugggaguccugucaugguauuggggauggaaaggcacacagacgggaaacaugcaaagcuguggaggguauggauaagccgcugcaugaaccacauaacuguggagggcagccgcugcaaguacugcauuuugcuugugcagguaacugcacuaccagccgugacuaccagcccgcagauag 
acggaaa gguuguacggggcgccguacg ugguugugggagaggggggggcugg ggauauga gugggccuguuagcucaguugguuagagcguggugcuaauaacgccaaggucaucgguucgaucccgauacgggccagcggaagccuuuugggccacg gc  acgcug aau  gcgc                                                                                                                                                                                                                                                                                         c
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ugccuuu ccaacaugccucgcggcaugc accaacacccucuccccccccgacu ccuauacu cacccggacaaucgagucaaccaaucucgcaccacgauuauugcgguuccaguagccaagcuagggcuaugcccggucgccuucggaaaacccggugu ug  ugcgac uug  cgcg                                                                                                                                                                                                                                                                                         c
       a                     g                         c        a                                                                                                  c  ac      a   ca    cccguuccggguuuuccauaaacggaccauccugccugccgguuuguaauaaaccucccagccccggcgagcuccaacacaugcaacaccacccucaccccaccggagaaucgucuuucgucauaccaccgcaacaccuagugucggcaacaacaaaagggaacaagaaccacccggucaacguacggucuucccguacccuuccggugaggaaaacuaacaccaaccgugccguuacuugucgugucuuguuacguagacgaucguaugacgaacgugua
Get sequence
Deep sequencing
15 reads, 1 experiments
Genome context
Coordinates (CHLRE3.1) Overlapping transcripts
scaffold_86: 94576-95507 [-]
intergenic

Mature sequence cre-miR916

Accession MIMAT0004405
Sequence

110 -  

ccaaggucaucgguucgaucc

 - 130

Get sequence
Deep sequencing 4 reads, 1 experiments
Evidence experimental; cloned [1]

References

1
PMID:17470535 "A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii" Zhao T, Li G, Mi S, Li S, Hannon GJ, Wang XJ, Qi Y Genes Dev. 21:1190-1203(2007).