Stem-loop sequence ppt-MIR899

Accession MI0005682
Description Physcomitrella patens miR899 stem-loop
Gene family MIPF0000996; MIR899
Stem-loop 
------acggcguuuuucucggagaaaaauaccauccuuugguucaacaa       ugc  u uc  c      auacaac     -cca uu  -  u      uugacgagu 
                                                  cgguugc   gu u  ca guucgg       ccugc    g  gc ug gagaga         g
                                                  |||||||   || |  || ||||||       |||||    |  || || ||||||         c
                                                  gcuaacg   ca a  gu caagcc       ggacg    c  ug ac cuuucu         a
gguuaucgucgacccauacgaucagugacuaagacuucgccggccacaca       cua  u ga  -      -gcuucc     caga cu  u  -      cccagaaga
Get sequence
Deep sequencing
674 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_459: 1646-1867 [+]
intergenic

Mature sequence ppt-miR899

Accession MIMAT0004369
Sequence

152 -  

aacugagauacaucgcaaucg

 - 172

Get sequence
Evidence experimental; cloned [1]

References

1
PMID:17359535 "Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution" Fattash I, Voss B, Reski R, Hess WR, Frank W BMC Plant Biol. 7:13(2007).