Stem-loop sequence mtr-MIR171c

Accession

MI0005597 (change log)

Description

Medicago truncatula miR171c stem-loop

Gene family

MIPF0000030; MIR171_1

Literature search

8 open access papers mention mtr-MIR171c
(60 sentences)

Stem-loop

   a             u       c      --------    -     aauaa   u 
5'  uugagauauuggc ugguuca ucagaa        gaaa caaaa     cac a
    ||||||||||||| ||||||| ||||||        |||| |||||     ||| c
3'  aacuuuauaaccg gccgagu aguuuu        uuuu guuuu     gug u
   a             u       u      aguuuuag    a     -guaa   u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 8935780-8935884 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0005597

Mature sequence mtr-miR171c

• Accession: MIMAT0011083
• Sequence: 80 - ugauugagccgugccaauauu - 100
• Evidence: by similarity; MI0001792

References

1. " Bonnet E Unpublished (2007).