Stem-loop sequence hsa-mir-876

Accession

MI0005542

Symbol

HGNC:MIR876

Description

Homo sapiens miR-876 stem-loop

Gene family

MIPF0000430; mir-876

Stem-loop

u    ug         u                aucuaa  u 
 gaag  cuguggauu cuuugugaaucaccau      gc a
 ||||  ||||||||| ||||||||||||||||      ||  
 cuuc  gauacuuaa gaaacauuugguggug      ug a
a    gu         u                -----g  u 

Deep sequencing

250 reads, 13 experiments

Genome context

• Coordinates (GRCh37.p5): chr9: 28863624-28863704 [-]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 100126310;MIR876
• HGNC: 33653;MIR876

Mature sequence hsa-miR-876-5p

• Accession: MIMAT0004924
• Sequence: 11 - uggauuucuuugugaaucacca - 32
• Deep sequencing: 181 reads, 10 experiments
• Evidence: experimental; cloned [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-876-5p
  • MICRORNA.ORG:hsa-miR-876-5p
  • MIRDB:hsa-miR-876-5p
  • RNA22-HSA:hsa-miR-876-5p
  • TARGETMINER:hsa-miR-876-5p
  • TARGETSCAN-VERT:hsa-miR-876-5p

Mature sequence hsa-miR-876-3p

• Accession: MIMAT0004925
• Sequence: 50 - uggugguuuacaaaguaauuca - 71
• Deep sequencing: 69 reads, 9 experiments
• Evidence: experimental; cloned [1]
• Validated targets:
  • MIRTARBASE:hsa-miR-876-3p
  • TARBASE:hsa-miR-876-3p
• Predicted targets:
  • DIANA-MICROT:hsa-miR-876-3p
  • MICRORNA.ORG:hsa-miR-876-3p
  • MIRDB:hsa-miR-876-3p
  • RNA22-HSA:hsa-miR-876-3p
  • TARGETMINER:hsa-miR-876-3p
  • TARGETSCAN-VERT:hsa-miR-876-3p

References

1. PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).