Stem-loop sequence hsa-mir-875

Accession MI0005541
Symbol HGNC:MIR875
Description Homo sapiens miR-875 stem-loop
Gene family MIPF0000424; mir-875
Stem-loop 
--      gu  uau        u  a       uucu 
  uuagug  ac   accucagu uu ucaggug    u
  ||||||  ||   |||||||| || |||||||     
  agucac  ug   uggaguca aa gguccac    a
ca      uc  ugu        c  a       uaaa
Get sequence
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 100549014-100549089 [-]
antisense
OTTHUMT00000379825 ; VPS13B-009; intron 1
OTTHUMT00000379825 ; VPS13B-009; intron 1
OTTHUMT00000379825 ; VPS13B-009; intron 1
OTTHUMT00000277137 ; VPS13B-001; intron 30
OTTHUMT00000277138 ; VPS13B-002; intron 30
OTTHUMT00000277137 ; VPS13B-001; intron 30
OTTHUMT00000277138 ; VPS13B-002; intron 30
OTTHUMT00000277137 ; VPS13B-001; intron 30
OTTHUMT00000277138 ; VPS13B-002; intron 30
OTTHUMT00000277139 ; VPS13B-003; intron 31
OTTHUMT00000277139 ; VPS13B-003; intron 31
OTTHUMT00000277139 ; VPS13B-003; intron 31
ENST00000521559 ; VPS13B-009; intron 1
ENST00000521559 ; VPS13B-009; intron 1
ENST00000521559 ; VPS13B-009; intron 1
ENST00000357162 ; VPS13B-001; intron 30
ENST00000358544 ; VPS13B-002; intron 30
ENST00000357162 ; VPS13B-001; intron 30
ENST00000358544 ; VPS13B-002; intron 30
ENST00000357162 ; VPS13B-001; intron 30
ENST00000358544 ; VPS13B-002; intron 30
ENST00000496144 ; VPS13B-003; intron 31
ENST00000395996 ; VPS13B-201; intron 31
ENST00000496144 ; VPS13B-003; intron 31
ENST00000395996 ; VPS13B-201; intron 31
ENST00000496144 ; VPS13B-003; intron 31
ENST00000395996 ; VPS13B-201; intron 31
Clustered miRNAs
< 10kb from hsa-mir-875
hsa-mir-875 chr8: 100549014-100549089 [-]
hsa-mir-599 chr8: 100548864-100548958 [-]
Database links

Mature sequence hsa-miR-875-5p

Accession MIMAT0004922
Sequence

11 -  

uauaccucaguuuuaucaggug

 - 32

Get sequence
Evidence experimental; cloned [1]
Predicted targets

Mature sequence hsa-miR-875-3p

Accession MIMAT0004923
Sequence

45 -  

ccuggaaacacugagguugug

 - 65

Get sequence
Evidence experimental; cloned [1]
Predicted targets

References

1
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).