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miRBase |
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Stem-loop sequence osa-MIR812a |
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Accession | MI0005233 (change log) | ||||
Description | Oryza sativa miR812a stem-loop | ||||
Gene family | MIPF0000345; MIR812 | ||||
Literature search |
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10 open access papers mention osa-MIR812a | ||||
Stem-loop |
cc uuacacu auc a uuu uuacu ---uu - g c g 5' accuccgu caaaauaagugcaguu auuc uccaa guuugaucguucgucuuauuugaaaa uuuauga auuuuua guua uuacau auaaaa au a |||||||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||| ||||||| |||| |||||| |||||| || a 3' uggaggca guuuuauucacgucgg uagg agguu caaauuggcaggcagaauaaacuuuu aaauacu uaaaaau uaau agugug uauuuu ug u aa -cacuuu cac g --u ---uu uuuuu c - a a |
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Deep sequencing |
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Confidence |
Annotation confidence: low
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Comments |
miR812 was misnamed miR569 by Luo et al [1]. |
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Genome context |
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Database links |
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Mature sequence osa-miR812a |
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Accession | MIMAT0004049 |
Sequence |
175 - gacggacgguuaaacguuggac - 196 |
Deep sequencing | 5160 reads, 2 experiments |
Evidence | experimental; cloned [1], Northern [1] |
Database links |
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References |
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1 |
PMID:16959252
"Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"
FEBS Lett. 580:5111-5116(2006).
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