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miRBase |
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Stem-loop sequence sme-mir-31b-1 |
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Accession | MI0005146 (change log) | ||||
Previous IDs | sme-mir-31b | ||||
Description | Schmidtea mediterranea miR-31b-1 stem-loop | ||||
Gene family | MIPF0000064; mir-31 | ||||
Literature search |
1 open access papers mention sme-mir-31b-1 | ||||
Stem-loop |
auga a c g c a acu 5' auugaua ca gg aagau cugg auagcug uaa a ||||||| || || ||||| |||| ||||||| ||| 3' uaacuau gu cc uucua gacu uaucgac auu u auaa c u g - c auu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-31b-5p |
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Accession | MIMAT0003980 |
Previous IDs | sme-miR-31b |
Sequence |
14 - aggcaagaugcuggcauagcuga - 36 |
Evidence | experimental; Illumina [1-2], 454 [2] |
Mature sequence sme-miR-31b-1-3p |
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Accession | MIMAT0011413 |
Previous IDs | sme-miR-31b-1* |
Sequence |
52 - cagcuauucaggaucuuucccu - 73 |
Evidence | experimental; 454 [2], Illumina [2-3] |
References |
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1 |
PMID:16849698
"MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology"
RNA. 12:1640-1649(2006).
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2 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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3 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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