Stem-loop sequence ath-MIR782

Accession MI0005112
Description Arabidopsis thaliana miR782 stem-loop
Gene family MIPF0001269; MIR2934
Stem-loop 
           a     a        g      aaauaagaugaaaaggcuauu 
aaccuuuuucu caaac ccuuggau uucuuu                     a
||||||||||| ||||| |||||||| ||||||                     u
uuggagaaaga guuug ggaaccua aagaaa                     u
           c     c        a      accgaaguacaacaaguaauc
Get sequence
Genome context
Coordinates (TAIR10) Overlapping transcripts
chr3: 5500037-5500147 [+]
intergenic
Clustered miRNAs
< 10kb from ath-MIR782
ath-MIR5023 chr3: 5496985-5497119 [-]
ath-MIR2934 chr3: 5500032-5500152 [-]
ath-MIR782 chr3: 5500037-5500147 [+]

Mature sequence ath-miR782

Accession MIMAT0003941
Sequence

12 -  

acaaacaccuuggauguucuu

 - 32

Get sequence
Evidence experimental; MPSS [1], Northern [1]

References

1
PMID:16954541 "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC Genome Res. 16:1276-1288(2006).