Stem-loop sequence ath-MIR776

Accession MI0005106
Description Arabidopsis thaliana miR776 stem-loop
Stem-loop 
 ug  a   u     c    -         uu    ag   a  u     -   u   aa 
u  gg uua agcca gaac ucaauagaa  cuua  auc ug gaaaa cgu gac  g
|  || ||| ||||| |||| |||||||||  ||||  ||| || ||||| ||| |||   
a  cc aau ucggu cuug aguuaucuu  gaau  uag ac cuuuu gca cug  a
 gu  -   u     a    u         cu    cu   a  -     a   u   cu
Get sequence
Deep sequencing
16 reads, 3 experiments
Genome context
Coordinates (TAIR10) Overlapping transcripts
chr1: 22795618-22795735 [+]
intergenic

Mature sequence ath-miR776

Accession MIMAT0003935
Sequence

82 -  

ucuaagucuucuauugauguu

 - 102

Get sequence
Deep sequencing 12 reads, 3 experiments
Evidence experimental; MPSS [1], Northern [1], 454 [2], cloned [2]

References

1
PMID:16954541 "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC Genome Res. 16:1276-1288(2006).
2
PMID:17299599 "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes" Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC PLoS One. 2:e219(2007).