Stem-loop sequence MI0005018

Accession MI0005018
ID bta-mir-30e
Description Bos taurus miR-30e stem-loop
Stem-loop 
g        uu  ua            uu           g aag    
 ggcagucu  gc  cuguaaacaucc  gacuggaagcu u   gcg 
 ||||||||  ||  ||||||||||||  ||||||||||| |   || u
 ccgucgga  cg  gacauuuguagg  cugacuuucga g   cgu 
a        --  gc            --           g -aa
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Genome context
Coordinates (BTAU4.0) Overlapping transcripts
3: 112440564-112440655 [-]
sense
ENSBTAT00000029254 ; NFYC_BOVIN; intron 5
ENSBTAT00000025381 ; NFYC_BOVIN; intron 5
Clustered miRNAs
< 10kb from bta-mir-30e
bta-mir-30e 3: 112440564-112440655 [-]
bta-mir-30c 3: 112437430-112437534 [-]
Database links
Gene family

MIPF0000005; mir-30

Mature sequence MIMAT0003799

Accession MIMAT0003799
ID bta-miR-30e-5p
Sequence

17 -  

uguaaacauccuugacuggaagcu

 - 40

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Evidence experimental; cloned [1]
Predicted targets

References

1
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues" Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP Physiol Genomics. 29:35-43(2007).