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miRBase |
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Stem-loop sequence bta-mir-142 |
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Accession | MI0005011 (change log) | ||||
Description | Bos taurus miR-142 stem-loop | ||||
Gene family | MIPF0000084; mir-142 | ||||
Literature search |
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16 open access papers mention bta-mir-142 | ||||
Stem-loop |
g g c a uaa ag a 5' acagugca uca ccauaaaguag aagcacuac c c c |||||||| ||| ||||||||||| ||||||||| | | 3' ugucaugu agu gguauuucauc uuugugaug g g u g g a c -ug ga g |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
In addition to the mature miR-142 sequence shown here, Gu et al. also cloned the offset sequence CCCAUAAAGUAGAAAGCACUA just once [2]. This sequence aligns with that cloned in chicken (MI0001281). |
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Genome context |
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Database links |
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Mature sequence bta-miR-142-5p |
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Accession | MIMAT0003790 |
Previous IDs | bta-miR-142 |
Sequence |
16 - cauaaaguagaaagcacuac - 35 |
Deep sequencing | 363692 reads, 75 experiments |
Evidence | experimental; cloned [2] |
Predicted targets |
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Mature sequence bta-miR-142-3p |
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Accession | MIMAT0003791 |
Previous IDs | bta-miR-142* |
Sequence |
55 - aguguuuccuacuuuauggaug - 76 |
Deep sequencing | 33373 reads, 70 experiments |
Evidence | experimental; cloned [1] |
Predicted targets |
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References |
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1 |
PMID:17105755
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"
Physiol Genomics. 29:35-43(2007).
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2 |
PMID:17306260
"Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"
FEBS Lett. 581:981-988(2007).
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