Stem-loop sequence ppt-MIR1212

Accession MI0004711
Description Physcomitrella patens miR1212 stem-loop
Stem-loop 
g  ug    g      c  c      g     a    -    g c 
 ua  agga uugcau cu ugcugu cccac ugcg ucgu g g
 ||  |||| |||||| || |||||| ||||| |||| |||| |  
 au  uccu ggcgua ga acgaca gggug gcgc ggcg u c
-  gu    a      a  u      -     c    c    g g
Get sequence
Deep sequencing
5494 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_107: 19126-19214 [-]
intergenic

Mature sequence ppt-miR1212

Accession MIMAT0003901
Sequence

59 -  

cgugggacagcauagaaugcg

 - 79

Get sequence
Deep sequencing 5427 reads, 3 experiments
Evidence experimental; Northern [1], cloned [2], 454 [3]

References

1
PMID:16824179 "Novel micro-RNAs and intermediates of micro-RNA biogenesis from moss" Talmor-Neiman M, Stav R, Frank W, Voss B, Arazi T Plant J. 47:25-37(2006).
2
PMID:17359535 "Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution" Fattash I, Voss B, Reski R, Hess WR, Frank W BMC Plant Biol. 7:13(2007).
3
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).