Stem-loop sequence mmu-mir-505

Accession MI0004706
Symbol MGI:Mir505
Description Mus musculus miR-505 stem-loop
Gene family MIPF0000217; mir-505
Stem-loop 
aaau      ac    u   gg      g    a        -u  g 
    ugaugc  ccag ggg  agccag aagu uugauguu  cu c
    ||||||  |||| |||  |||||| |||| ||||||||  ||  
    acuaug  gguc cuc  uugguc uuca aacugcga  gg c
----      -a    u   uu      g    c        uu  a
Get sequence
Deep sequencing
16884 reads, 91 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chrX: 60394403-60394492 [-]
sense
OTTMUST00000042675 ; Atp11c-003; intron 1
OTTMUST00000042662 ; Atp11c-001; intron 1
ENSMUST00000101527 ; Atp11c-202; intron 1
ENSMUST00000033480 ; Atp11c-201; intron 1
ENSMUST00000138569 ; Atp11c-003; intron 1
ENSMUST00000154051 ; Atp11c-001; intron 1
Database links

Mature sequence mmu-miR-505-5p

Accession MIMAT0017259
Sequence

20 -  

gggagccaggaaguauugauguu

 - 42

Get sequence
Deep sequencing 3332 reads, 74 experiments
Evidence experimental; Solexa [3]
Predicted targets

Mature sequence mmu-miR-505-3p

Accession MIMAT0003513
Previous IDs mmu-miR-505
Sequence

56 -  

cgucaacacuugcugguuuucu

 - 77

Get sequence
Deep sequencing 506 reads, 58 experiments
Evidence experimental; MPSS [1], Solexa [2-3]
Validated targets
Predicted targets

References

1
PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).
2
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
3
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).