Stem-loop sequence mmu-mir-667

Accession MI0004196
Symbol MGI:Mir667
Description Mus musculus miR-667 stem-loop
Gene family MIPF0000794; mir-667
Stem-loop 
      --acu     c  u     u ga    -  ag    ccauac 
gugggu     ggccu gg gcugg g  gcag ug  cacg      a
||||||     ||||| || ||||| |  |||| ||  ||||       
cacccg     ccgga cc cgacc c  cguc ac  gugu      u
      gaucc     a  -     - ac    c  -a    cuauau
Get sequence
Deep sequencing
7389 reads, 47 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr12: 109720006-109720097 [+]
intergenic
Clustered miRNAs
< 10kb from mmu-mir-667
mmu-mir-411 chr12: 109710175-109710256 [+]
mmu-mir-299a chr12: 109710638-109710700 [+]
mmu-mir-299b chr12: 109710645-109710693 [-]
mmu-mir-380 chr12: 109711803-109711863 [+]
mmu-mir-1197 chr12: 109712317-109712436 [+]
mmu-mir-323 chr12: 109712508-109712593 [+]
mmu-mir-758 chr12: 109712810-109712890 [+]
mmu-mir-329 chr12: 109713481-109713577 [+]
mmu-mir-494 chr12: 109715318-109715402 [+]
mmu-mir-679 chr12: 109715577-109715650 [+]
mmu-mir-1193 chr12: 109715671-109715791 [+]
mmu-mir-666 chr12: 109717085-109717183 [+]
mmu-mir-543 chr12: 109717258-109717333 [+]
mmu-mir-495 chr12: 109718754-109718816 [+]
mmu-mir-667 chr12: 109720006-109720097 [+]
mmu-mir-376c chr12: 109722718-109722803 [+]
mmu-mir-654 chr12: 109723218-109723301 [+]
mmu-mir-376b chr12: 109723458-109723539 [+]
mmu-mir-376a chr12: 109723781-109723848 [+]
mmu-mir-300 chr12: 109724313-109724391 [+]
mmu-mir-381 chr12: 109726822-109726896 [+]
mmu-mir-487b chr12: 109727333-109727414 [+]
mmu-mir-539 chr12: 109728129-109728202 [+]
mmu-mir-544 chr12: 109729325-109729402 [+]
Database links

Mature sequence mmu-miR-667-5p

Accession MIMAT0017239
Previous IDs mmu-miR-667*
Sequence

15 -  

cggugcugguggagcagugagcacg

 - 39

Get sequence
Deep sequencing 289 reads, 34 experiments
Evidence experimental; Solexa [4]
Predicted targets

Mature sequence mmu-miR-667-3p

Accession MIMAT0003734
Previous IDs mmu-miR-667
Sequence

56 -  

ugacaccugccacccagcccaag

 - 78

Get sequence
Deep sequencing 7099 reads, 44 experiments
Evidence experimental; MPSS [1], cloned [2], Solexa [3-4]
Predicted targets

References

1
PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).
2
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
3
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
4
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).