Stem-loop sequence hsa-mir-378d-2

Accession MI0003840
Description Homo sapiens miR-378d-2 stem-loop
Stem-loop 
   ug   a  a    -    cacu           -ca   -a    uc 
gaa  guu ca ggag agaa    ggacuuggagu   gaa  acuu  a
|||  ||| || |||| ||||    |||||||||||   |||  ||||   
uuu  uag gu ccuu ucuu    ccugaaucucg   cuu  ugaa  u
   gu   a  a    g    -uac           ucc   ac    cc
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Deep sequencing
reads, experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 94928250-94928347 [-]
antisense
OTTHUMT00000378414 ; PDP1-005; intron 1
OTTHUMT00000378414 ; PDP1-005; intron 1
OTTHUMT00000378414 ; PDP1-005; intron 1
ENST00000523021 ; PDP1-005; intron 1
ENST00000523021 ; PDP1-005; intron 1
ENST00000523021 ; PDP1-005; intron 1
Database links

Mature sequence hsa-miR-378d

Accession MIMAT0018926
Sequence

22 -  

acuggacuuggagucagaaa

 - 41

Get sequence
Evidence experimental; RAKE [1], Solexa [2]
Predicted targets

References

1
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2
PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).