Stem-loop sequence hsa-mir-769

Accession

MI0003834

Symbol

HGNC:MIR769

Description

Homo sapiens miR-769 stem-loop

Gene family

MIPF0000727; mir-769

Stem-loop

gc     u   --  uu   g        c ug       u   u   g    g   ugu 
  cuugg gcu  ga  ccu ggcucuga c  agaccuc ggg ucu agcu uga   u
  ||||| |||  ||  ||| |||||||| |  ||||||| ||| ||| |||| |||    
  gaacc ugg  cu  ggg ccgggacu g  ucugggg cuc agg ucga gcu   g
-c     u   gu  cc   g        u gu       c   u   g    -   cuc 

Deep sequencing

628 reads, 32 experiments

Genome context

• Coordinates (GRCh37.p5): chr19: 46522190-46522307 [+]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 768217;MIR769
• HGNC: 33138;MIR769

Mature sequence hsa-miR-769-5p

• Accession: MIMAT0003886
• Sequence: 30 - ugagaccucuggguucugagcu - 51
• Deep sequencing: 495 reads, 24 experiments
• Evidence: experimental; cloned [1]
• Validated targets:
  • MIRTARBASE:hsa-miR-769-5p
  • TARBASE:hsa-miR-769-5p
• Predicted targets:
  • DIANA-MICROT:hsa-miR-769-5p
  • MICRORNA.ORG:hsa-miR-769-5p
  • MIRDB:hsa-miR-769-5p
  • RNA22-HSA:hsa-miR-769-5p
  • TARGETMINER:hsa-miR-769-5p
  • TARGETSCAN-VERT:hsa-miR-769-5p

Mature sequence hsa-miR-769-3p

• Accession: MIMAT0003887
• Sequence: 69 - cugggaucuccggggucuugguu - 91
• Deep sequencing: 132 reads, 19 experiments
• Evidence: experimental; cloned [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-769-3p
  • MICRORNA.ORG:hsa-miR-769-3p
  • MIRDB:hsa-miR-769-3p
  • RNA22-HSA:hsa-miR-769-3p
  • TARGETMINER:hsa-miR-769-3p
  • TARGETSCAN-VERT:hsa-miR-769-3p

References

1. PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).