Stem-loop sequence hsa-mir-1283-1

Accession MI0003832
Symbol HGNC:MIR1283-1
Description Homo sapiens miR-1283-1 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
--       ua   g   ac     a           g  g c 
  cucaagc  uga ucu  aaagg aagcgcuuucu uu u a
  |||||||  ||| |||  ||||| ||||||||||| || | g
  gaguuug  auu gga  uuucc uucgcgaaaga aa a a
aa       gc   g   gu     c           g  g a
Get sequence
Deep sequencing
22 reads, 9 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 54191735-54191821 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-1283-1
hsa-mir-515-1 chr19: 54182257-54182339 [+]
hsa-mir-519e chr19: 54183194-54183277 [+]
hsa-mir-520f chr19: 54185413-54185499 [+]
hsa-mir-515-2 chr19: 54188263-54188345 [+]
hsa-mir-519c chr19: 54189723-54189809 [+]
hsa-mir-1283-1 chr19: 54191735-54191821 [+]
hsa-mir-520a chr19: 54194135-54194219 [+]
hsa-mir-526b chr19: 54197647-54197729 [+]
hsa-mir-519b chr19: 54198467-54198547 [+]
hsa-mir-525 chr19: 54200787-54200871 [+]
hsa-mir-523 chr19: 54201639-54201725 [+]
Database links

Mature sequence hsa-miR-1283

Accession MIMAT0005799
Sequence

14 -  

ucuacaaaggaaagcgcuuucu

 - 35

Get sequence
Deep sequencing 42 reads, 8 experiments
Evidence experimental; Solexa [2]
Predicted targets

References

1
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).