Stem-loop sequence hsa-mir-1323

Accession MI0003786
Symbol HGNC:MIR1323
Description Homo sapiens miR-1323 stem-loop
Gene family MIPF0000617; mir-1323
Stem-loop 
ac   g             a  g         gugg 
  uga guccucaaaacug gg gcauuuucu    u
  ||| ||||||||||||| || |||||||||    u
  acu uagggguuuugac cc cgugaaagg    u
-a   g             -  a         aaag
Get sequence
Deep sequencing
209 reads, 8 experiments
Comments

This sequence was identified as a miRNA candidate by Berezikov et al [1], and confirmed later by cloning [2]. Afanasyeva et al. refer to this sequence using the internal identifier MYCNAMP_NB2_61 [2].

Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 54175222-54175294 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-1323
hsa-mir-512-1 chr19: 54169933-54170016 [+]
hsa-mir-512-2 chr19: 54172411-54172508 [+]
hsa-mir-1323 chr19: 54175222-54175294 [+]
hsa-mir-498 chr19: 54177451-54177574 [+]
hsa-mir-520e chr19: 54178965-54179051 [+]
hsa-mir-515-1 chr19: 54182257-54182339 [+]
hsa-mir-519e chr19: 54183194-54183277 [+]
Database links

Mature sequence hsa-miR-1323

Accession MIMAT0005795
Sequence

11 -  

ucaaaacugaggggcauuuucu

 - 32

Get sequence
Deep sequencing 207 reads, 6 experiments
Evidence experimental; RAKE [1], cloned [2]
Predicted targets

References

1
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2
PMID:18230126 "New miRNAs cloned from neuroblastoma" Afanasyeva EA, Hotz-Wagenblatt A, Glatting KH, Westermann F BMC Genomics. 9:52(2008).