Stem-loop sequence hsa-mir-1296

Accession MI0003780
Symbol HGNC:MIR1296
Description Homo sapiens miR-1296 stem-loop
Gene family MIPF0000649; mir-1296
Stem-loop 
---a       aacu         c cu        cu   u     a 
    ccuaccu    ggguuaggg c  ggcuccau  ccu uagga a
    |||||||    ||||||||| |  ||||||||  ||| ||||| a
    gggugga    cccaauccc g  ucggggug  ggg gucuu c
uguc       ----         a cu        ag   u     c
Get sequence
Deep sequencing
262 reads, 21 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr10: 65132717-65132808 [-]
sense
OTTHUMT00000048249 ; JMJD1C-001; intron 2
OTTHUMT00000048249 ; JMJD1C-001; intron 2
OTTHUMT00000048249 ; JMJD1C-001; intron 2
OTTHUMT00000413375 ; JMJD1C-009; intron 3
OTTHUMT00000413375 ; JMJD1C-009; intron 3
OTTHUMT00000413375 ; JMJD1C-009; intron 3
ENST00000399262 ; JMJD1C-001; intron 2
ENST00000399251 ; JMJD1C-201; intron 2
ENST00000399262 ; JMJD1C-001; intron 2
ENST00000399251 ; JMJD1C-201; intron 2
ENST00000399262 ; JMJD1C-001; intron 2
ENST00000399251 ; JMJD1C-201; intron 2
ENST00000554702 ; JMJD1C-009; intron 3
ENST00000554702 ; JMJD1C-009; intron 3
ENST00000554702 ; JMJD1C-009; intron 3
Database links

Mature sequence hsa-miR-1296

Accession MIMAT0005794
Sequence

16 -  

uuagggcccuggcuccaucucc

 - 37

Get sequence
Deep sequencing 240 reads, 19 experiments
Evidence experimental; Solexa [2], 454 [3]
Validated targets
Predicted targets

References

1
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).
3
PMID:19508715 "Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing" Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, Tolstrup N, Moller S, Krogh A, Litman T BMC Med Genomics. 2:35(2009).