Stem-loop sequence hsa-mir-758

Accession MI0003757
Symbol HGNC:MIR758
Description Homo sapiens miR-758 stem-loop
Gene family MIPF0000126; mir-379
Stem-loop 
-gcc       a    --a    u      aga   c   - uuu 
    uggauac ugag   uggu gaccag   gca acg c   a
    ||||||| ||||   |||| ||||||   ||| ||| |   u
    aucuaug acuc   auca cugguc   ugu ugc g   u
cgua       -    cca    c      cag   u   c ugu
Get sequence
Deep sequencing
36 reads, 11 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr14: 101492357-101492444 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-758
hsa-mir-379 chr14: 101488403-101488469 [+]
hsa-mir-411 chr14: 101489662-101489757 [+]
hsa-mir-299 chr14: 101490131-101490193 [+]
hsa-mir-380 chr14: 101491354-101491414 [+]
hsa-mir-1197 chr14: 101491901-101491988 [+]
hsa-mir-323a chr14: 101492069-101492154 [+]
hsa-mir-758 chr14: 101492357-101492444 [+]
hsa-mir-329-1 chr14: 101493122-101493201 [+]
hsa-mir-329-2 chr14: 101493437-101493520 [+]
hsa-mir-494 chr14: 101495971-101496051 [+]
hsa-mir-1193 chr14: 101496389-101496466 [+]
hsa-mir-543 chr14: 101498324-101498401 [+]
hsa-mir-495 chr14: 101500092-101500173 [+]
Database links

Mature sequence hsa-miR-758-5p

Accession MIMAT0022929
Sequence

15 -  

gaugguugaccagagagcacac

 - 36

Get sequence
Deep sequencing 15 reads, 3 experiments
Evidence experimental; SOLiD [3]

Mature sequence hsa-miR-758-3p

Accession MIMAT0003879
Previous IDs hsa-miR-758
Sequence

52 -  

uuugugaccugguccacuaacc

 - 73

Get sequence
Deep sequencing 21 reads, 8 experiments
Evidence experimental; cloned [1-2], SOLiD [3]
Predicted targets

References

1
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
3
PMID:22282338 "Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs" Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F RNA. 18:472-484(2012).