Stem-loop sequence hsa-mir-658

Accession MI0003682
Symbol HGNC:MIR658
Description Homo sapiens miR-658 stem-loop
Gene family MIPF0000643; mir-658
Stem-loop 
g    g  g   - g --uu       --  g   gc     --agc   c  a 
 cucg uu ccg u g    gcgggcc  cu ccc  ccgcc     ucg ug c
 |||| || ||| | |    |||||||  || |||  |||||     ||| ||  
 gagc aa ggc g c    ugccugg  ga ggg  ggcgg     agc ac a
g    -  g   u g uggu       au  a   -a     gacuc   -  g
Get sequence
Deep sequencing
12 reads, 6 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr22: 38240279-38240378 [-]
sense
OTTHUMT00000319490 ; ANKRD54-001; 5'UTR (exon 1)
OTTHUMT00000319494 ; ANKRD54-005; 5'UTR (exon 1)
OTTHUMT00000319490 ; ANKRD54-001; 5'UTR (exon 1)
OTTHUMT00000319493 ; ANKRD54-004; 5'UTR (exon 1)
OTTHUMT00000319497 ; ANKRD54-008; 5'UTR (exon 1)
OTTHUMT00000319494 ; ANKRD54-005; 5'UTR (exon 1)
OTTHUMT00000319490 ; ANKRD54-001; 5'UTR (exon 1)
OTTHUMT00000319493 ; ANKRD54-004; 5'UTR (exon 1)
OTTHUMT00000319497 ; ANKRD54-008; 5'UTR (exon 1)
OTTHUMT00000319494 ; ANKRD54-005; 5'UTR (exon 1)
ENST00000215941 ; ANKRD54-001; 5'UTR (exon 1)
ENST00000434930 ; ANKRD54-005; 5'UTR (exon 1)
ENST00000215941 ; ANKRD54-001; 5'UTR (exon 1)
ENST00000411961 ; ANKRD54-004; 5'UTR (exon 1)
ENST00000413497 ; ANKRD54-008; 5'UTR (exon 1)
ENST00000434930 ; ANKRD54-005; 5'UTR (exon 1)
ENST00000215941 ; ANKRD54-001; 5'UTR (exon 1)
ENST00000411961 ; ANKRD54-004; 5'UTR (exon 1)
ENST00000413497 ; ANKRD54-008; 5'UTR (exon 1)
ENST00000434930 ; ANKRD54-005; 5'UTR (exon 1)
Clustered miRNAs
< 10kb from hsa-mir-658
hsa-mir-659 chr22: 38243685-38243781 [-]
hsa-mir-658 chr22: 38240279-38240378 [-]
Database links

Mature sequence hsa-miR-658

Accession MIMAT0003336
Sequence

61 -  

ggcggagggaaguagguccguuggu

 - 85

Get sequence
Deep sequencing 12 reads, 6 experiments
Evidence experimental; Microarray [1], SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).