Stem-loop sequence hsa-mir-411

Accession MI0003675
Symbol HGNC:MIR411
Description Homo sapiens miR-411 stem-loop
Gene family MIPF0000126; mir-379
Stem-loop 
--------------       ug   a a    a      a a       - uuu 
              ugguacu  gag g uagu gaccgu u gcguacg c   a
              |||||||  ||| | |||| |||||| | ||||||| |   u
              acuauga  cuc c auca cuggca a uguaugc g   c
gagccccuaccuaa       --   c a    c      c a       a ugu
Get sequence
Deep sequencing
490 reads, 16 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr14: 101489662-101489757 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-411
hsa-mir-379 chr14: 101488403-101488469 [+]
hsa-mir-411 chr14: 101489662-101489757 [+]
hsa-mir-299 chr14: 101490131-101490193 [+]
hsa-mir-380 chr14: 101491354-101491414 [+]
hsa-mir-1197 chr14: 101491901-101491988 [+]
hsa-mir-323a chr14: 101492069-101492154 [+]
hsa-mir-758 chr14: 101492357-101492444 [+]
hsa-mir-329-1 chr14: 101493122-101493201 [+]
hsa-mir-329-2 chr14: 101493437-101493520 [+]
hsa-mir-494 chr14: 101495971-101496051 [+]
hsa-mir-1193 chr14: 101496389-101496466 [+]
hsa-mir-543 chr14: 101498324-101498401 [+]
Database links

Mature sequence hsa-miR-411-5p

Accession MIMAT0003329
Previous IDs hsa-miR-411
Sequence

16 -  

uaguagaccguauagcguacg

 - 36

Get sequence
Deep sequencing 341 reads, 16 experiments
Evidence experimental; Microarray [1], RT-PCR [1], SAGE [1], cloned [2]
Predicted targets

Mature sequence hsa-miR-411-3p

Accession MIMAT0004813
Previous IDs hsa-miR-411*
Sequence

51 -  

uauguaacacgguccacuaacc

 - 72

Get sequence
Deep sequencing 149 reads, 1 experiments
Evidence experimental; cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).