Stem-loop sequence hsa-mir-661

Accession

MI0003669

Symbol

HGNC:MIR661

Description

Homo sapiens miR-661 stem-loop

Gene family

MIPF0000465; mir-661

Stem-loop

ggaga    gu   g gg  -  g         u   -   u   uuc 
     ggcu  gcu u  gg ca gcgcaggcc gag ccc ggu   g
     ||||  ||| |  || || ||||||||| ||| ||| |||    
     ucgg  ugg g  uc gu cgcguccgg cuc ggg ccg   g
-----    --   g uu  a  g         u   u   u   ucg 

Genome context

• Coordinates (GRCh37.p5): chr8: 145019359-145019447 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000383281 ; PLEC-001; intron 1

  OTTHUMT00000383282 ; PLEC-008; intron 1

  OTTHUMT00000383283 ; PLEC-009; intron 1

  OTTHUMT00000383856 ; PLEC-003; intron 1

  OTTHUMT00000383858 ; PLEC-010; intron 1

  OTTHUMT00000383859 ; PLEC-015; intron 1

  OTTHUMT00000383860 ; PLEC-014; intron 1

  OTTHUMT00000383861 ; PLEC-013; intron 1

  OTTHUMT00000383862 ; PLEC-012; intron 1

  OTTHUMT00000383281 ; PLEC-001; intron 1

  OTTHUMT00000383282 ; PLEC-008; intron 1

  OTTHUMT00000383283 ; PLEC-009; intron 1

  OTTHUMT00000383856 ; PLEC-003; intron 1

  OTTHUMT00000383858 ; PLEC-010; intron 1

  OTTHUMT00000383859 ; PLEC-015; intron 1

  OTTHUMT00000383860 ; PLEC-014; intron 1

  OTTHUMT00000383861 ; PLEC-013; intron 1

  OTTHUMT00000383862 ; PLEC-012; intron 1

  OTTHUMT00000383281 ; PLEC-001; intron 1

  OTTHUMT00000383282 ; PLEC-008; intron 1

  OTTHUMT00000383283 ; PLEC-009; intron 1

  OTTHUMT00000383856 ; PLEC-003; intron 1

  OTTHUMT00000383858 ; PLEC-010; intron 1

  OTTHUMT00000383859 ; PLEC-015; intron 1

  OTTHUMT00000383860 ; PLEC-014; intron 1

  OTTHUMT00000383861 ; PLEC-013; intron 1

  OTTHUMT00000383862 ; PLEC-012; intron 1

  OTTHUMT00000383284 ; PLEC-002; intron 2

  OTTHUMT00000383284 ; PLEC-002; intron 2

  OTTHUMT00000383284 ; PLEC-002; intron 2

  ENST00000322810 ; PLEC-001; intron 1

  ENST00000354958 ; PLEC-008; intron 1

  ENST00000356346 ; PLEC-009; intron 1

  ENST00000527096 ; PLEC-003; intron 1

  ENST00000528025 ; PLEC-010; intron 1

  ENST00000526416 ; PLEC-015; intron 1

  ENST00000527816 ; PLEC-014; intron 1

  ENST00000528131 ; PLEC-013; intron 1

  ENST00000532346 ; PLEC-012; intron 1

  ENST00000322810 ; PLEC-001; intron 1

  ENST00000354958 ; PLEC-008; intron 1

  ENST00000356346 ; PLEC-009; intron 1

  ENST00000527096 ; PLEC-003; intron 1

  ENST00000528025 ; PLEC-010; intron 1

  ENST00000526416 ; PLEC-015; intron 1

  ENST00000527816 ; PLEC-014; intron 1

  ENST00000528131 ; PLEC-013; intron 1

  ENST00000532346 ; PLEC-012; intron 1

  ENST00000322810 ; PLEC-001; intron 1

  ENST00000354958 ; PLEC-008; intron 1

  ENST00000356346 ; PLEC-009; intron 1

  ENST00000527096 ; PLEC-003; intron 1

  ENST00000528025 ; PLEC-010; intron 1

  ENST00000526416 ; PLEC-015; intron 1

  ENST00000527816 ; PLEC-014; intron 1

  ENST00000528131 ; PLEC-013; intron 1

  ENST00000532346 ; PLEC-012; intron 1

  ENST00000436759 ; PLEC-002; intron 2

  ENST00000436759 ; PLEC-002; intron 2

  ENST00000436759 ; PLEC-002; intron 2

Database links

• ENTREZGENE: 724031;MIR661
• HGNC: 32917;MIR661

Mature sequence hsa-miR-661

• Accession: MIMAT0003324
• Sequence: 51 - ugccugggucucuggccugcgcgu - 74
• Evidence: experimental; SAGE [1]
• Validated targets:
  • MIRECORDS:hsa-miR-661
  • MIRTARBASE:hsa-miR-661
  • TARBASE:hsa-miR-661
• Predicted targets:
  • DIANA-MICROT:hsa-miR-661
  • MICRORNA.ORG:hsa-miR-661
  • MIRDB:hsa-miR-661
  • RNA22-HSA:hsa-miR-661
  • TARGETMINER:hsa-miR-661
  • TARGETSCAN-VERT:hsa-miR-661

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).