Stem-loop sequence hsa-mir-647

Accession MI0003662
Symbol HGNC:MIR647
Description Homo sapiens miR-647 stem-loop
Gene family MIPF0000939; mir-647
Stem-loop 
---   aag g ug    g  g   c  u a        a     aggaa  c 
   agg   u u  gccu ug cug ac c cuuccuuc gcccc     gc u
   |||   | |  |||| || ||| || | |||||||| |||||     ||  
   ucc   g g  cggg ac gac ug g gagggagg cgggg     ug u
cag   --g g gu    -  g   -  - -        a     ---gc  g
Get sequence
Deep sequencing
13 reads, 7 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr20: 62573984-62574079 [-]
sense
OTTHUMT00000080236 ; UCKL1-001; intron 8
OTTHUMT00000080236 ; UCKL1-001; intron 8
OTTHUMT00000080236 ; UCKL1-001; intron 8
ENST00000369892 ; UCKL1-202; intron 7
ENST00000358711 ; UCKL1-201; intron 7
ENST00000369892 ; UCKL1-202; intron 7
ENST00000358711 ; UCKL1-201; intron 7
ENST00000369892 ; UCKL1-202; intron 7
ENST00000358711 ; UCKL1-201; intron 7
ENST00000354216 ; UCKL1-001; intron 8
ENST00000369908 ; UCKL1-203; intron 8
ENST00000354216 ; UCKL1-001; intron 8
ENST00000369908 ; UCKL1-203; intron 8
ENST00000354216 ; UCKL1-001; intron 8
ENST00000369908 ; UCKL1-203; intron 8
Clustered miRNAs
< 10kb from hsa-mir-647
hsa-mir-647 chr20: 62573984-62574079 [-]
hsa-mir-1914 chr20: 62572818-62572897 [-]
Database links

Mature sequence hsa-miR-647

Accession MIMAT0003317
Sequence

16 -  

guggcugcacucacuuccuuc

 - 36

Get sequence
Evidence experimental; Microarray [1], SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).