Stem-loop sequence hsa-mir-643

Accession MI0003658
Symbol HGNC:MIR643
Description Homo sapiens miR-643 stem-loop
Gene family MIPF0000488; mir-643
Stem-loop 
accaaguga      u                a        a   gg gu 
         uauuca ugucuaccugagcuag auacaagu guu  c  c
         |||||| |||||||||||||||| |||||||| |||  |  u
         guaagu auagauggacucgauc uauguuca cag  g  u
----aaaaa      u                g        -   -a ac
Get sequence
Deep sequencing
15 reads, 6 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 52785050-52785146 [+]
sense
ENST00000439461 ; ZNF766-202; intron 1
ENST00000359102 ; ZNF766-201; intron 1
ENST00000439461 ; ZNF766-202; intron 1
ENST00000359102 ; ZNF766-201; intron 1
ENST00000439461 ; ZNF766-202; intron 1
ENST00000359102 ; ZNF766-201; intron 1
Database links

Mature sequence hsa-miR-643

Accession MIMAT0003313
Sequence

61 -  

acuuguaugcuagcucagguag

 - 82

Get sequence
Deep sequencing 15 reads, 6 experiments
Evidence experimental; SAGE [1]
Validated targets
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).