Stem-loop sequence hsa-mir-641

Accession

MI0003656

Symbol

HGNC:MIR641

Description

Homo sapiens miR-641 stem-loop

Gene family

MIPF0000679; mir-641

Stem-loop

-u      a                    ag            ccucu u 
  ggguga aggaaggaaagacauaggau  agucaccucugu     g c
  |||||| ||||||||||||||||||||  ||||||||||||     |  
  cccauu uccuuccuuucuguauccug  ucaguggagaua     c c
uc      c                    --            uccau u 

Deep sequencing

147 reads, 21 experiments

Genome context

• Coordinates (GRCh37.p5): chr19: 40788450-40788548 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000268029 ; AKT2-001; intron 1

  OTTHUMT00000268032 ; AKT2-004; intron 1

  OTTHUMT00000268033 ; AKT2-005; intron 1

  OTTHUMT00000268034 ; AKT2-006; intron 1

  OTTHUMT00000268029 ; AKT2-001; intron 1

  OTTHUMT00000268032 ; AKT2-004; intron 1

  OTTHUMT00000268033 ; AKT2-005; intron 1

  OTTHUMT00000268034 ; AKT2-006; intron 1

  OTTHUMT00000268029 ; AKT2-001; intron 1

  OTTHUMT00000441274 ; AKT2-026; intron 1

  OTTHUMT00000441275 ; AKT2-024; intron 1

  OTTHUMT00000441276 ; AKT2-025; intron 1

  OTTHUMT00000268033 ; AKT2-005; intron 1

  OTTHUMT00000441508 ; AKT2-029; intron 1

  OTTHUMT00000441754 ; AKT2-042; intron 1

  OTTHUMT00000268034 ; AKT2-006; intron 1

  OTTHUMT00000441509 ; AKT2-030; intron 1

  OTTHUMT00000441511 ; AKT2-031; intron 1

  OTTHUMT00000268035 ; AKT2-007; intron 2

  OTTHUMT00000268035 ; AKT2-007; intron 2

  OTTHUMT00000268035 ; AKT2-007; intron 2

  ENST00000392038 ; AKT2-001; intron 1

  ENST00000486368 ; AKT2-004; intron 1

  ENST00000452077 ; AKT2-005; intron 1

  ENST00000456441 ; AKT2-006; intron 1

  ENST00000358335 ; AKT2-202; intron 1

  ENST00000392038 ; AKT2-001; intron 1

  ENST00000486368 ; AKT2-004; intron 1

  ENST00000452077 ; AKT2-005; intron 1

  ENST00000456441 ; AKT2-006; intron 1

  ENST00000358335 ; AKT2-202; intron 1

  ENST00000392038 ; AKT2-001; intron 1

  ENST00000391844 ; AKT2-026; intron 1

  ENST00000584288 ; AKT2-024; intron 1

  ENST00000579047 ; AKT2-025; intron 1

  ENST00000452077 ; AKT2-005; intron 1

  ENST00000578123 ; AKT2-029; intron 1

  ENST00000358335 ; AKT2-042; intron 1

  ENST00000456441 ; AKT2-006; intron 1

  ENST00000583859 ; AKT2-030; intron 1

  ENST00000581582 ; AKT2-031; intron 1

  ENST00000423127 ; AKT2-007; intron 2

  ENST00000423127 ; AKT2-007; intron 2

  ENST00000423127 ; AKT2-007; intron 2

Database links

• ENTREZGENE: 693226;MIR641
• HGNC: 32897;MIR641

Mature sequence hsa-miR-641

• Accession: MIMAT0003311
• Sequence: 16 - aaagacauaggauagagucaccuc - 39
• Deep sequencing: 139 reads, 19 experiments
• Evidence: experimental; SAGE [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-641
  • MICRORNA.ORG:hsa-miR-641
  • MIRDB:hsa-miR-641
  • RNA22-HSA:hsa-miR-641
  • TARGETMINER:hsa-miR-641
  • TARGETSCAN-VERT:hsa-miR-641

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).