Stem-loop sequence hsa-mir-638

Accession

MI0003653

Symbol

HGNC:MIR638

Description

Homo sapiens miR-638 stem-loop

Gene family

MIPF0000486; mir-638

Stem-loop

gugagcg     g    gg u   g     -  --    -   ----ua  -g   g 
       ggcgc gcag  a cgc ggcgg gu  ggcg gcc      gg  cgc g
       ||||| ||||  | ||| ||||| ||  |||| |||      ||  ||| a
       ucgcg cguc  u gcg ccgcc cg  ccgc cgg      cc  gcg g
-------     g    aa -   g     g  ug    g   uaaggg  ag   g 

Genome context

• Coordinates (GRCh37.p5): chr19: 10829080-10829179 [+]
• Overlapping transcripts:

  sense

  ENST00000389252 ; DNM2-204; intron 1

  ENST00000408974 ; DNM2-206; intron 1

  ENST00000355667 ; DNM2-202; intron 1

  ENST00000359692 ; DNM2-203; intron 1

  ENST00000389253 ; DNM2-205; intron 1

  ENST00000314646 ; DNM2-201; intron 1

  ENST00000389252 ; DNM2-204; intron 1

  ENST00000408974 ; DNM2-206; intron 1

  ENST00000355667 ; DNM2-202; intron 1

  ENST00000359692 ; DNM2-203; intron 1

  ENST00000389253 ; DNM2-205; intron 1

  ENST00000314646 ; DNM2-201; intron 1

  ENST00000408974 ; DNM2-205; intron 1

  ENST00000355667 ; DNM2-202; intron 1

  ENST00000359692 ; DNM2-203; intron 1

  ENST00000389253 ; DNM2-204; intron 1

  ENST00000314646 ; DNM2-201; intron 1

Database links

• ENTREZGENE: 693223;MIR638
• HGNC: 32894;MIR638

Mature sequence hsa-miR-638

• Accession: MIMAT0003308
• Sequence: 16 - agggaucgcgggcggguggcggccu - 40
• Evidence: experimental; Microarray [1], SAGE [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-638
  • MICRORNA.ORG:hsa-miR-638
  • MIRDB:hsa-miR-638
  • RNA22-HSA:hsa-miR-638
  • TARGETMINER:hsa-miR-638
  • TARGETSCAN-VERT:hsa-miR-638

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).