Stem-loop sequence hsa-mir-632

Accession

MI0003647

Symbol

HGNC:MIR632

Description

Homo sapiens miR-632 stem-loop

Gene family

MIPF0000527; mir-632

Stem-loop

-  c  c       a  g  ug            g  g    cga      
 cg cu cuaccgc gu cu  acgggaggcgga cg ggaa   ggccg 
 || || ||||||| || ||  |||||||||||| || ||||   |||| u
 gc ga gguggug ca gg  uguccuucgucu gu uuuu   ccggc 
u  c  u       -  g  --            -  g    --a      

Deep sequencing

3 reads, 3 experiments

Genome context

• Coordinates (GRCh37.p5): chr17: 30677128-30677221 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000256249 ; ZNF207-001; 3'UTR (exon 1)

  OTTHUMT00000256250 ; ZNF207-002; 3'UTR (exon 1)

  OTTHUMT00000256249 ; ZNF207-001; 3'UTR (exon 1)

  OTTHUMT00000256250 ; ZNF207-002; 3'UTR (exon 1)

  OTTHUMT00000256251 ; ZNF207-003; 3'UTR (exon 1)

  OTTHUMT00000447125 ; RP11-227G15.3-001; intron 1

  OTTHUMT00000447126 ; RP11-227G15.3-002; intron 1

  OTTHUMT00000256249 ; ZNF207-001; 3'UTR (exon 1)

  OTTHUMT00000256251 ; ZNF207-003; 3'UTR (exon 1)

  OTTHUMT00000256250 ; ZNF207-002; 3'UTR (exon 1)

  OTTHUMT00000447128 ; ZNF207-009; 3'UTR (exon 1)

  OTTHUMT00000447130 ; ZNF207-010; 3'UTR (exon 1)

  OTTHUMT00000447131 ; ZNF207-005; 3'UTR (exon 1)

  OTTHUMT00000447132 ; ZNF207-006; 3'UTR (exon 1)

  OTTHUMT00000447133 ; ZNF207-011; 3'UTR (exon 1)

  OTTHUMT00000447134 ; ZNF207-012; 3'UTR (exon 1)

  OTTHUMT00000447135 ; ZNF207-013; exon 1

  ENST00000394670 ; ZNF207-001; 3'UTR (exon 1)

  ENST00000394673 ; ZNF207-002; 3'UTR (exon 1)

  ENST00000394679 ; ZNF207-203; 3'UTR (exon 1)

  ENST00000321233 ; ZNF207-201; 3'UTR (exon 1)

  ENST00000341711 ; ZNF207-202; 3'UTR (exon 1)

  ENST00000394670 ; ZNF207-001; 3'UTR (exon 1)

  ENST00000394673 ; ZNF207-002; 3'UTR (exon 1)

  ENST00000342555 ; ZNF207-003; 3'UTR (exon 1)

  ENST00000394679 ; ZNF207-203; 3'UTR (exon 1)

  ENST00000321233 ; ZNF207-201; 3'UTR (exon 1)

  ENST00000341711 ; ZNF207-202; 3'UTR (exon 1)

  ENST00000581915 ; RP11-227G15.3-001; intron 1

  ENST00000578389 ; RP11-227G15.3-002; intron 1

  ENST00000394670 ; ZNF207-001; 3'UTR (exon 1)

  ENST00000321233 ; ZNF207-003; 3'UTR (exon 1)

  ENST00000394673 ; ZNF207-002; 3'UTR (exon 1)

  ENST00000579634 ; ZNF207-009; 3'UTR (exon 1)

  ENST00000580759 ; ZNF207-010; 3'UTR (exon 1)

  ENST00000342555 ; ZNF207-005; 3'UTR (exon 1)

  ENST00000577908 ; ZNF207-006; 3'UTR (exon 1)

  ENST00000394679 ; ZNF207-011; 3'UTR (exon 1)

  ENST00000582165 ; ZNF207-012; 3'UTR (exon 1)

  ENST00000577324 ; ZNF207-013; exon 1

  ENST00000341711 ; ZNF207-201; 3'UTR (exon 1)

Database links

• ENTREZGENE: 693217;MIR632
• HGNC: 32888;MIR632

Mature sequence hsa-miR-632

• Accession: MIMAT0003302
• Sequence: 61 - gugucugcuuccuguggga - 79
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; SAGE [1]
• Validated targets:
  • MIRTARBASE:hsa-miR-632
  • TARBASE:hsa-miR-632
• Predicted targets:
  • DIANA-MICROT:hsa-miR-632
  • MICRORNA.ORG:hsa-miR-632
  • MIRDB:hsa-miR-632
  • RNA22-HSA:hsa-miR-632
  • TARGETMINER:hsa-miR-632
  • TARGETSCAN-VERT:hsa-miR-632

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).