Stem-loop sequence hsa-mir-627

Accession MI0003641
Symbol HGNC:MIR627
Description Homo sapiens miR-627 stem-loop
Gene family MIPF0000550; mir-627
Stem-loop 
---------ua       c              u              ug u 
           cuuauua ugguagugagucuc aagaaaagaggagg  g u
           ||||||| |||||||||||||| ||||||||||||||  |  
           gaauaau accaucacucagag uucuuuucuccucc  u g
aucaucauaaa       a              u              uu u
Get sequence
Deep sequencing
10 reads, 6 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr15: 42491768-42491864 [-]
sense
OTTHUMT00000252861 ; VPS39-001; intron 2
OTTHUMT00000252861 ; VPS39-001; intron 2
OTTHUMT00000420472 ; VPS39-002; intron 2
OTTHUMT00000420481 ; VPS39-004; intron 2
OTTHUMT00000252861 ; VPS39-001; intron 2
OTTHUMT00000420472 ; VPS39-002; intron 2
OTTHUMT00000420481 ; VPS39-004; intron 2
ENST00000318006 ; VPS39-001; intron 2
ENST00000348544 ; VPS39-201; intron 2
ENST00000318006 ; VPS39-001; intron 2
ENST00000348544 ; VPS39-002; intron 2
ENST00000568357 ; VPS39-004; intron 2
ENST00000318006 ; VPS39-001; intron 2
ENST00000348544 ; VPS39-002; intron 2
ENST00000568357 ; VPS39-004; intron 2
Database links

Mature sequence hsa-miR-627

Accession MIMAT0003296
Sequence

16 -  

gugagucucuaagaaaagagga

 - 37

Get sequence
Deep sequencing 2 reads, 1 experiments
Evidence experimental; SAGE [1], cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).