Stem-loop sequence hsa-mir-625

Accession MI0003639
Symbol HGNC:MIR625
Description Homo sapiens miR-625 stem-loop
Gene family MIPF0000534; mir-625
Stem-loop 
                                     uaau 
aggguagagggaugagggggaaaguucuauaguccug    u
|||||||||||||||||||||||||||||||||||||    a
ucccgucucccuacucccccuuucaagauaucaggac    g
                                     ucua
Get sequence
Deep sequencing
425 reads, 20 experiments
Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr14: 65937820-65937904 [+]
sense
OTTHUMT00000412044 ; FUT8-003; intron 1
OTTHUMT00000412052 ; FUT8-007; intron 1
OTTHUMT00000412044 ; FUT8-003; intron 1
OTTHUMT00000412052 ; FUT8-007; intron 1
OTTHUMT00000412044 ; FUT8-003; intron 1
OTTHUMT00000412052 ; FUT8-007; intron 1
OTTHUMT00000286406 ; FUT8-001; intron 2
OTTHUMT00000412046 ; FUT8-005; intron 2
OTTHUMT00000412047 ; FUT8-004; intron 2
OTTHUMT00000412049 ; FUT8-010; intron 2
OTTHUMT00000412050 ; FUT8-013; intron 2
OTTHUMT00000286407 ; FUT8-002; intron 2
OTTHUMT00000412051 ; FUT8-011; intron 2
OTTHUMT00000286406 ; FUT8-001; intron 2
OTTHUMT00000412046 ; FUT8-005; intron 2
OTTHUMT00000412047 ; FUT8-004; intron 2
OTTHUMT00000412049 ; FUT8-010; intron 2
OTTHUMT00000412050 ; FUT8-013; intron 2
OTTHUMT00000286407 ; FUT8-002; intron 2
OTTHUMT00000412051 ; FUT8-011; intron 2
OTTHUMT00000286406 ; FUT8-001; intron 2
OTTHUMT00000412046 ; FUT8-005; intron 2
OTTHUMT00000412047 ; FUT8-004; intron 2
OTTHUMT00000412049 ; FUT8-010; intron 2
OTTHUMT00000412050 ; FUT8-013; intron 2
OTTHUMT00000286407 ; FUT8-002; intron 2
OTTHUMT00000412051 ; FUT8-011; intron 2
OTTHUMT00000412045 ; FUT8-006; intron 3
OTTHUMT00000412045 ; FUT8-006; intron 3
OTTHUMT00000412045 ; FUT8-006; intron 3
ENST00000554610 ; FUT8-007; intron 1
ENST00000394586 ; FUT8-003; intron 1
ENST00000394586 ; FUT8-003; intron 1
ENST00000554610 ; FUT8-007; intron 1
ENST00000394586 ; FUT8-003; intron 1
ENST00000554610 ; FUT8-007; intron 1
ENST00000342677 ; FUT8-005; intron 2
ENST00000557164 ; FUT8-004; intron 2
ENST00000555559 ; FUT8-010; intron 2
ENST00000553924 ; FUT8-013; intron 2
ENST00000358307 ; FUT8-002; intron 2
ENST00000557338 ; FUT8-011; intron 2
ENST00000394585 ; FUT8-201; intron 2
ENST00000360689 ; FUT8-001; intron 2
ENST00000360689 ; FUT8-001; intron 2
ENST00000342677 ; FUT8-005; intron 2
ENST00000557164 ; FUT8-004; intron 2
ENST00000555559 ; FUT8-010; intron 2
ENST00000553924 ; FUT8-013; intron 2
ENST00000358307 ; FUT8-002; intron 2
ENST00000557338 ; FUT8-011; intron 2
ENST00000394585 ; FUT8-201; intron 2
ENST00000360689 ; FUT8-001; intron 2
ENST00000342677 ; FUT8-005; intron 2
ENST00000557164 ; FUT8-004; intron 2
ENST00000555559 ; FUT8-010; intron 2
ENST00000553924 ; FUT8-013; intron 2
ENST00000358307 ; FUT8-002; intron 2
ENST00000557338 ; FUT8-011; intron 2
ENST00000394585 ; FUT8-201; intron 2
ENST00000556518 ; FUT8-006; intron 3
ENST00000556518 ; FUT8-006; intron 3
ENST00000556518 ; FUT8-006; intron 3
Database links

Mature sequence hsa-miR-625-5p

Accession MIMAT0003294
Previous IDs hsa-miR-625
Sequence

15 -  

agggggaaaguucuauagucc

 - 35

Get sequence
Deep sequencing 213 reads, 15 experiments
Evidence experimental; Microarray [1], RT-PCR [1], SAGE [1], cloned [2]
Validated targets
Predicted targets

Mature sequence hsa-miR-625-3p

Accession MIMAT0004808
Previous IDs hsa-miR-625*
Sequence

52 -  

gacuauagaacuuucccccuca

 - 73

Get sequence
Deep sequencing 211 reads, 16 experiments
Evidence experimental; cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).