Stem-loop sequence hsa-mir-623

Accession

MI0003637

Symbol

HGNC:MIR623

Description

Homo sapiens miR-623 stem-loop

Gene family

MIPF0000798; mir-623

Stem-loop

-guacaca     ag    ccu       gc       uu  a   ua     
        guaga  cauc   ugcaggg  uguuggg  gc ucc  agcu 
        |||||  ||||   |||||||  |||||||  || |||  ||| g
        cguuu  guag   augucuc  guagccc  cg agg  ucgu 
gucuucca     cu    ---       au       uu  -   --     

Genome context

• Coordinates (GRCh37.p5): chr13: 100008385-100008482 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000045591 ; UBAC2-005; intron 3

  OTTHUMT00000045594 ; UBAC2-008; intron 3

  OTTHUMT00000045591 ; UBAC2-005; intron 3

  OTTHUMT00000045594 ; UBAC2-008; intron 3

  OTTHUMT00000045591 ; UBAC2-005; intron 3

  OTTHUMT00000045594 ; UBAC2-008; intron 3

  OTTHUMT00000045589 ; UBAC2-003; intron 4

  OTTHUMT00000045590 ; UBAC2-004; intron 4

  OTTHUMT00000045589 ; UBAC2-003; intron 4

  OTTHUMT00000045590 ; UBAC2-004; intron 4

  OTTHUMT00000045589 ; UBAC2-003; intron 4

  OTTHUMT00000045590 ; UBAC2-004; intron 4

  OTTHUMT00000045587 ; UBAC2-001; intron 5

  OTTHUMT00000045592 ; UBAC2-006; intron 5

  OTTHUMT00000045587 ; UBAC2-001; intron 5

  OTTHUMT00000045592 ; UBAC2-006; intron 5

  OTTHUMT00000045587 ; UBAC2-001; intron 5

  OTTHUMT00000045592 ; UBAC2-006; intron 5

  OTTHUMT00000045588 ; UBAC2-002; intron 7

  OTTHUMT00000045588 ; UBAC2-002; intron 7

  OTTHUMT00000045588 ; UBAC2-002; intron 7

  ENST00000355700 ; UBAC2-008; intron 3

  ENST00000480738 ; UBAC2-005; intron 3

  ENST00000355700 ; UBAC2-008; intron 3

  ENST00000480738 ; UBAC2-005; intron 3

  ENST00000355700 ; UBAC2-008; intron 3

  ENST00000480738 ; UBAC2-005; intron 3

  ENST00000494576 ; UBAC2-003; intron 4

  ENST00000460562 ; UBAC2-004; intron 4

  ENST00000494576 ; UBAC2-003; intron 4

  ENST00000460562 ; UBAC2-004; intron 4

  ENST00000494576 ; UBAC2-003; intron 4

  ENST00000460562 ; UBAC2-004; intron 4

  ENST00000376440 ; UBAC2-001; intron 5

  ENST00000473194 ; UBAC2-006; intron 5

  ENST00000376440 ; UBAC2-001; intron 5

  ENST00000473194 ; UBAC2-006; intron 5

  ENST00000376440 ; UBAC2-001; intron 5

  ENST00000473194 ; UBAC2-006; intron 5

  ENST00000403766 ; UBAC2-002; intron 7

  ENST00000403766 ; UBAC2-002; intron 7

  ENST00000403766 ; UBAC2-002; intron 7

Database links

• ENTREZGENE: 693208;MIR623
• HGNC: 32879;MIR623

Mature sequence hsa-miR-623

• Accession: MIMAT0003292
• Sequence: 16 - aucccuugcaggggcuguugggu - 38
• Evidence: experimental; Microarray [1], SAGE [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-623
  • MICRORNA.ORG:hsa-miR-623
  • MIRDB:hsa-miR-623
  • RNA22-HSA:hsa-miR-623
  • TARGETMINER:hsa-miR-623
  • TARGETSCAN-VERT:hsa-miR-623

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).