Stem-loop sequence hsa-mir-621

Accession

MI0003635

Symbol

HGNC:MIR621

Description

Homo sapiens miR-621 stem-loop

Gene family

MIPF0000631; mir-621

Stem-loop

uagauuga   ---      u   u        g  c     u   cug   aa 
        gga   aggggc gag gguaggcg ug ugcug gcu   aug  g
        |||   |||||| ||| |||||||| || ||||| |||   |||   
        ccu   ucucug uuu ccauucgc ac acgau cgg   uac  a
--------   ggg      u   -        g  a     -   -ug   cc 

Genome context

• Coordinates (GRCh37.p5): chr13: 41384902-41384997 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000044638 ; SLC25A15-003; intron 7

  OTTHUMT00000044638 ; SLC25A15-003; intron 7

  OTTHUMT00000044638 ; SLC25A15-003; intron 7

  ENST00000426521 ; SLC25A15-003; intron 7

  ENST00000426521 ; SLC25A15-003; intron 7

  ENST00000426521 ; SLC25A15-003; intron 7

Database links

• ENTREZGENE: 693206;MIR621
• HGNC: 32877;MIR621

Mature sequence hsa-miR-621

• Accession: MIMAT0003290
• Sequence: 61 - ggcuagcaacagcgcuuaccu - 81
• Evidence: experimental; SAGE [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-621
  • MICRORNA.ORG:hsa-miR-621
  • MIRDB:hsa-miR-621
  • RNA22-HSA:hsa-miR-621
  • TARGETMINER:hsa-miR-621
  • TARGETSCAN-VERT:hsa-miR-621

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).