Stem-loop sequence hsa-mir-611

Accession

MI0003624

Symbol

HGNC:MIR611

Description

Homo sapiens miR-611 stem-loop

Gene family

MIPF0000539; mir-611

Stem-loop

aaaau   g   g g        ag   -  gac 
     ggu aga c uugagggg  uuc ca   g
     ||| ||| | ||||||||  ||| ||    
     cca ucu g ggcucccc  gag gu   g
-acac   g   - g        ag   c  aga 

Deep sequencing

8 reads, 7 experiments

Genome context

• Coordinates (GRCh37.p5): chr11: 61559967-61560033 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000398577 ; C11orf10-001; intron 1

  OTTHUMT00000398578 ; C11orf10-006; intron 1

  OTTHUMT00000398579 ; C11orf10-004; intron 1

  OTTHUMT00000398580 ; C11orf10-005; intron 1

  OTTHUMT00000398581 ; C11orf10-002; intron 1

  OTTHUMT00000398576 ; C11orf10-007; 5'UTR (exon 1)

  OTTHUMT00000398582 ; C11orf10-003; intron 1

  OTTHUMT00000398577 ; C11orf10-001; intron 1

  OTTHUMT00000398578 ; C11orf10-006; intron 1

  OTTHUMT00000398579 ; C11orf10-004; intron 1

  OTTHUMT00000398580 ; C11orf10-005; intron 1

  OTTHUMT00000398581 ; C11orf10-002; intron 1

  OTTHUMT00000398576 ; C11orf10-007; 5'UTR (exon 1)

  OTTHUMT00000398582 ; C11orf10-003; intron 1

  OTTHUMT00000398577 ; C11orf10-001; intron 1

  OTTHUMT00000398578 ; C11orf10-006; intron 1

  OTTHUMT00000398579 ; C11orf10-004; intron 1

  OTTHUMT00000398580 ; C11orf10-005; intron 1

  OTTHUMT00000398581 ; C11orf10-002; intron 1

  OTTHUMT00000398576 ; C11orf10-007; 5'UTR (exon 1)

  OTTHUMT00000398582 ; C11orf10-003; intron 1

  ENST00000537328 ; C11orf10-001; intron 1

  ENST00000541893 ; C11orf10-006; intron 1

  ENST00000545210 ; C11orf10-004; intron 1

  ENST00000257262 ; C11orf10-005; intron 1

  ENST00000535297 ; C11orf10-002; intron 1

  ENST00000543510 ; C11orf10-007; 5'UTR (exon 1)

  ENST00000540434 ; C11orf10-003; intron 1

  ENST00000537328 ; C11orf10-001; intron 1

  ENST00000541893 ; C11orf10-006; intron 1

  ENST00000545210 ; C11orf10-004; intron 1

  ENST00000257262 ; C11orf10-005; intron 1

  ENST00000535297 ; C11orf10-002; intron 1

  ENST00000543510 ; C11orf10-007; 5'UTR (exon 1)

  ENST00000540434 ; C11orf10-003; intron 1

  ENST00000537328 ; C11orf10-001; intron 1

  ENST00000541893 ; C11orf10-006; intron 1

  ENST00000545210 ; C11orf10-004; intron 1

  ENST00000257262 ; C11orf10-005; intron 1

  ENST00000535297 ; C11orf10-002; intron 1

  ENST00000543510 ; C11orf10-007; 5'UTR (exon 1)

  ENST00000540434 ; C11orf10-003; intron 1

Database links

• ENTREZGENE: 693196;MIR611
• HGNC: 32867;MIR611

Mature sequence hsa-miR-611

• Accession: MIMAT0003279
• Sequence: 40 - gcgaggaccccucggggucugac - 62
• Evidence: experimental; SAGE [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-611
  • MICRORNA.ORG:hsa-miR-611
  • MIRDB:hsa-miR-611
  • RNA22-HSA:hsa-miR-611
  • TARGETMINER:hsa-miR-611
  • TARGETSCAN-VERT:hsa-miR-611

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).