Stem-loop sequence hsa-mir-601

Accession

MI0003614

Symbol

HGNC:MIR601

Description

Homo sapiens miR-601 stem-loop

Gene family

MIPF0000522; mir-601

Stem-loop

ugcaugag   gu  --u  u  --      g    a  -   ca 
        uuc  cu   gg cu  aggauu uugg gg agu  g
        |||  ||   || ||  |||||| |||| || |||  a
        agg  gg   cc ga  uccuag gacc cc uca  a
--------   ug  uuu  u  ag      g    -  a   aa 

Genome context

• Coordinates (GRCh37.p5): chr9: 126164804-126164882 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000054003 ; DENND1A-008; intron 1

  OTTHUMT00000054003 ; DENND1A-008; intron 1

  OTTHUMT00000054003 ; DENND1A-008; intron 1

  OTTHUMT00000054002 ; DENND1A-007; intron 15

  OTTHUMT00000054002 ; DENND1A-007; intron 15

  OTTHUMT00000054002 ; DENND1A-007; intron 15

  OTTHUMT00000053997 ; DENND1A-002; intron 20

  OTTHUMT00000053999 ; DENND1A-004; intron 20

  OTTHUMT00000053997 ; DENND1A-002; intron 20

  OTTHUMT00000053999 ; DENND1A-004; intron 20

  OTTHUMT00000053997 ; DENND1A-002; intron 20

  OTTHUMT00000053999 ; DENND1A-004; intron 20

  ENST00000475421 ; DENND1A-008; intron 1

  ENST00000475421 ; DENND1A-008; intron 1

  ENST00000475421 ; DENND1A-008; intron 1

  ENST00000542603 ; DENND1A-203; intron 11

  ENST00000542603 ; DENND1A-203; intron 11

  ENST00000542603 ; DENND1A-203; intron 11

  ENST00000473039 ; DENND1A-007; intron 15

  ENST00000473039 ; DENND1A-007; intron 15

  ENST00000473039 ; DENND1A-007; intron 15

  ENST00000394219 ; DENND1A-202; intron 18

  ENST00000394219 ; DENND1A-202; intron 18

  ENST00000394219 ; DENND1A-202; intron 18

  ENST00000394215 ; DENND1A-201; intron 19

  ENST00000394215 ; DENND1A-201; intron 19

  ENST00000394215 ; DENND1A-201; intron 19

  ENST00000373624 ; DENND1A-002; intron 20

  ENST00000373620 ; DENND1A-004; intron 20

  ENST00000373624 ; DENND1A-002; intron 20

  ENST00000373620 ; DENND1A-004; intron 20

  ENST00000373624 ; DENND1A-002; intron 20

  ENST00000373620 ; DENND1A-004; intron 20

Database links

• ENTREZGENE: 693186;MIR601
• HGNC: 32857;MIR601

Mature sequence hsa-miR-601

• Accession: MIMAT0003269
• Sequence: 16 - uggucuaggauuguuggaggag - 37
• Evidence: experimental; Microarray [1], RT-PCR [1], SAGE [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-601
  • MICRORNA.ORG:hsa-miR-601
  • MIRDB:hsa-miR-601
  • RNA22-HSA:hsa-miR-601
  • TARGETMINER:hsa-miR-601
  • TARGETSCAN-VERT:hsa-miR-601

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).