Stem-loop sequence hsa-mir-598

Accession MI0003610
Symbol HGNC:MIR598
Description Homo sapiens miR-598 stem-loop
Gene family MIPF0000393; mir-598
Stem-loop 
gcuugaugaugcugcugaugcu         cc     gu  g   uggaa 
                      ggcggugau  cgaug  gu agc     a
                      |||||||||  |||||  || |||      
                      cugcuacug  gcuac  ca ucg     u
------gagccuacuacuacua         uu     ug  -   ugggg
Get sequence
Deep sequencing
933 reads, 19 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 10892716-10892812 [-]
sense
OTTHUMT00000383958 ; XKR6-002; intron 1
OTTHUMT00000383958 ; XKR6-002; intron 1
OTTHUMT00000383958 ; XKR6-002; intron 1
ENST00000416569 ; XKR6-002; intron 1
ENST00000416569 ; XKR6-002; intron 1
ENST00000416569 ; XKR6-002; intron 1
Database links

Mature sequence hsa-miR-598

Accession MIMAT0003266
Sequence

61 -  

uacgucaucguugucaucguca

 - 82

Get sequence
Deep sequencing 931 reads, 19 experiments
Evidence experimental; Microarray [1], SAGE [1], cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).