Stem-loop sequence hsa-mir-597

Accession MI0003609
Symbol HGNC:MIR597
Description Homo sapiens miR-597 stem-loop
Gene family MIPF0000479; mir-597
Stem-loop 
u   --          -----g  u     uc  u         gaag   gu 
 acu  uacucuacgu      ug gucac  ga gaccacugu    aca  a
 |||  ||||||||||      || |||||  || |||||||||    |||   
 ugg  augagaugua      ac cggug  cu uuggugaca    ugu  a
c   uc          augcga  u     uu  c         ----   aa
Get sequence
Deep sequencing
5 reads, 3 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 9599182-9599278 [+]
sense
OTTHUMT00000375042 ; TNKS-009; intron 1
OTTHUMT00000375042 ; TNKS-009; intron 1
OTTHUMT00000375042 ; TNKS-009; intron 1
OTTHUMT00000375041 ; TNKS-008; intron 2
OTTHUMT00000375041 ; TNKS-008; intron 2
OTTHUMT00000375041 ; TNKS-008; intron 2
OTTHUMT00000206935 ; TNKS-001; intron 17
OTTHUMT00000375036 ; TNKS-002; intron 17
OTTHUMT00000206935 ; TNKS-001; intron 17
OTTHUMT00000375036 ; TNKS-002; intron 17
OTTHUMT00000206935 ; TNKS-001; intron 17
OTTHUMT00000375036 ; TNKS-002; intron 17
ENST00000519191 ; TNKS-009; intron 1
ENST00000519191 ; TNKS-009; intron 1
ENST00000519191 ; TNKS-009; intron 1
ENST00000518635 ; TNKS-008; intron 2
ENST00000518635 ; TNKS-008; intron 2
ENST00000518635 ; TNKS-008; intron 2
ENST00000310430 ; TNKS-001; intron 17
ENST00000518281 ; TNKS-002; intron 17
ENST00000310430 ; TNKS-001; intron 17
ENST00000518281 ; TNKS-002; intron 17
ENST00000310430 ; TNKS-001; intron 17
ENST00000518281 ; TNKS-002; intron 17
Database links

Mature sequence hsa-miR-597

Accession MIMAT0003265
Sequence

16 -  

ugugucacucgaugaccacugu

 - 37

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; SAGE [1], cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).