Stem-loop sequence hsa-mir-548a-1

Accession MI0003593
Symbol HGNC:MIR548A1
Description Homo sapiens miR-548a-1 stem-loop
Gene family MIPF0000317; mir-548
Stem-loop 
---ug    gagguauuaag                   g u     c a   a 
     cagg           uuggugcaaaaguaauugu a uuuug c uua a
     ||||           ||||||||||||||||||| | ||||| | |||  
     gucc           aaccacguuuucauuaacg u aaaac g aau a
uuaug    ----------a                   g c     a c   g
Get sequence
Deep sequencing
273 reads, 20 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr6: 18572015-18572111 [+]
intergenic
Database links

Mature sequence hsa-miR-548a-3p

Accession MIMAT0003251
Previous IDs hsa-miR-548a
Sequence

61 -  

caaaacuggcaauuacuuuugc

 - 82

Get sequence
Deep sequencing 740 reads, 16 experiments
Evidence experimental; SAGE [1], cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).