Stem-loop sequence hsa-mir-580

Accession MI0003587
Symbol HGNC:MIR580
Description Homo sapiens miR-580 stem-loop
Gene family MIPF0000515; mir-580
Stem-loop 
auaa      ca                      ga          uaa 
    aauuuc  auuggaaccuaaugauucauca  cucagauauu   g
    ||||||  ||||||||||||||||||||||  ||||||||||   u
    uuaaag  uggccuuggauuacuaaguagu  gaguuuauga   u
----      ac                      aa          caa
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Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr5: 36147994-36148090 [-]
sense
OTTHUMT00000367552 ; LMBRD2-001; intron 1
OTTHUMT00000367552 ; LMBRD2-001; intron 1
OTTHUMT00000367552 ; LMBRD2-001; intron 1
ENST00000296603 ; LMBRD2-001; intron 1
ENST00000546130 ; LMBRD2-201; intron 1
ENST00000296603 ; LMBRD2-001; intron 1
ENST00000546130 ; LMBRD2-201; intron 1
ENST00000296603 ; LMBRD2-001; intron 1
Database links

Mature sequence hsa-miR-580

Accession MIMAT0003245
Sequence

61 -  

uugagaaugaugaaucauuagg

 - 82

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Evidence experimental; RT-PCR [1], SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).