Stem-loop sequence hsa-mir-575

AccessionMI0003582 (change log)
Symbol HGNC:MIR575
DescriptionHomo sapiens miR-575 stem-loop
Gene family MIPF0000586; mir-575
Literature search

11 open access papers mention hsa-mir-575
(43 sentences)

Stem-loop 
   ---------aauuca  -    -   -         -  -  u   --        
5'                gc ccug cca cuggcuuau gu ca gac  cuugggc 
                  || |||| ||| ||||||||| || || |||  |||||| u
3'                cg ggac ggu gaccgagua ca gu cug  ggacuca 
   cucaacucaccguga  a    a   u         a  c  -   uc
Get sequence
Deep sequencing
25 reads, 81.2 reads per million, 16 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr4: 82753337-82753430 [-]
sense
OTTHUMT00000363618 ; RASGEF1B-008; intron 2
OTTHUMT00000363619 ; RP11-689K5.3-002; intron 2
OTTHUMT00000363621 ; RP11-689K5.3-004; intron 2
OTTHUMT00000363622 ; RP11-689K5.3-001; intron 2
OTTHUMT00000363620 ; RP11-689K5.3-003; intron 3
ENST00000512716 ; RASGEF1B-008; intron 2
ENST00000514050 ; RP11-689K5.3-002; intron 2
ENST00000512343 ; RP11-689K5.3-004; intron 2
ENST00000508294 ; RP11-689K5.3-001; intron 2
ENST00000510780 ; RP11-689K5.3-003; intron 3
Database links

Mature sequence hsa-miR-575

Accession MIMAT0003240
Sequence

61 -  

gagccaguuggacaggagc

 - 79

Get sequence
Deep sequencing7 reads, 5 experiments
Evidence experimental; Microarray [1], SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).