Stem-loop sequence hsa-mir-569

Accession

MI0003576

Symbol

HGNC:MIR569

Description

Homo sapiens miR-569 stem-loop

Gene family

MIPF0000535; mir-569

Stem-loop

-    uu    ga        g     --       aac   aucagaa 
 ggua  guua  uuaauuuu uggga  cauuaac   agc       g
 ||||  ||||  |||||||| |||||  |||||||   |||        
 uuau  cagu  aauugaaa guccu  guaauug   ucg       c
u    uu    -g        g     aa       auu   acuacaa 

Genome context

• Coordinates (GRCh37.p5): chr3: 170824453-170824548 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000352977 ; TNIK-005; intron 18

  OTTHUMT00000352977 ; TNIK-005; intron 18

  OTTHUMT00000352977 ; TNIK-005; intron 18

  OTTHUMT00000352975 ; TNIK-003; intron 19

  OTTHUMT00000352979 ; TNIK-007; intron 19

  OTTHUMT00000352981 ; TNIK-009; intron 19

  OTTHUMT00000352975 ; TNIK-003; intron 19

  OTTHUMT00000352979 ; TNIK-007; intron 19

  OTTHUMT00000352981 ; TNIK-009; intron 19

  OTTHUMT00000352975 ; TNIK-003; intron 19

  OTTHUMT00000352979 ; TNIK-007; intron 19

  OTTHUMT00000352981 ; TNIK-009; intron 19

  OTTHUMT00000352976 ; TNIK-004; intron 20

  OTTHUMT00000352978 ; TNIK-006; intron 20

  OTTHUMT00000352980 ; TNIK-008; intron 20

  OTTHUMT00000352976 ; TNIK-004; intron 20

  OTTHUMT00000352978 ; TNIK-006; intron 20

  OTTHUMT00000352980 ; TNIK-008; intron 20

  OTTHUMT00000352976 ; TNIK-004; intron 20

  OTTHUMT00000352978 ; TNIK-006; intron 20

  OTTHUMT00000352980 ; TNIK-008; intron 20

  OTTHUMT00000352973 ; TNIK-001; intron 21

  OTTHUMT00000352973 ; TNIK-001; intron 21

  OTTHUMT00000352973 ; TNIK-001; intron 21

  ENST00000475336 ; TNIK-005; intron 18

  ENST00000475336 ; TNIK-005; intron 18

  ENST00000475336 ; TNIK-005; intron 18

  ENST00000341852 ; TNIK-003; intron 19

  ENST00000460047 ; TNIK-007; intron 19

  ENST00000470834 ; TNIK-009; intron 19

  ENST00000369326 ; TNIK-201; intron 19

  ENST00000538048 ; TNIK-202; intron 19

  ENST00000341852 ; TNIK-003; intron 19

  ENST00000460047 ; TNIK-007; intron 19

  ENST00000470834 ; TNIK-009; intron 19

  ENST00000369326 ; TNIK-201; intron 19

  ENST00000538048 ; TNIK-202; intron 19

  ENST00000341852 ; TNIK-003; intron 19

  ENST00000460047 ; TNIK-007; intron 19

  ENST00000470834 ; TNIK-009; intron 19

  ENST00000369326 ; TNIK-201; intron 19

  ENST00000538048 ; TNIK-202; intron 19

  ENST00000284483 ; TNIK-004; intron 20

  ENST00000357327 ; TNIK-006; intron 20

  ENST00000488470 ; TNIK-008; intron 20

  ENST00000284483 ; TNIK-004; intron 20

  ENST00000357327 ; TNIK-006; intron 20

  ENST00000488470 ; TNIK-008; intron 20

  ENST00000284483 ; TNIK-004; intron 20

  ENST00000357327 ; TNIK-006; intron 20

  ENST00000488470 ; TNIK-008; intron 20

  ENST00000436636 ; TNIK-001; intron 21

  ENST00000436636 ; TNIK-001; intron 21

  ENST00000436636 ; TNIK-001; intron 21

Database links

• ENTREZGENE: 693154;MIR569
• HGNC: 32825;MIR569

Mature sequence hsa-miR-569

• Accession: MIMAT0003234
• Sequence: 61 - aguuaaugaauccuggaaagu - 81
• Evidence: experimental; SAGE [1]
• Validated targets:
  • MIRTARBASE:hsa-miR-569
  • TARBASE:hsa-miR-569
• Predicted targets:
  • DIANA-MICROT:hsa-miR-569
  • MICRORNA.ORG:hsa-miR-569
  • MIRDB:hsa-miR-569
  • RNA22-HSA:hsa-miR-569
  • TARGETMINER:hsa-miR-569
  • TARGETSCAN-VERT:hsa-miR-569

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).