Stem-loop sequence rno-mir-370

Accession MI0003486
Description Rattus norvegicus miR-370 stem-loop
Gene family MIPF0000167; mir-370
Stem-loop 
       g         ca gu   u    u   a  g 
agacaga agaccaggu  c  cuc gcag uac ca c
||||||| |||||||||  |  ||| |||| ||| || u
ucugucu uuuggucca  g  ggg cguc gug gu c
       g         ag ug   u    c   a  a
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Genome context
Coordinates (RGSC3.4) Overlapping transcripts
6: 134210194-134210272 [+]
intergenic
Clustered miRNAs
< 10kb from rno-mir-370
rno-mir-341 6: 134203518-134203613 [+]
rno-mir-1188 6: 134203856-134203937 [+]
rno-mir-370 6: 134210194-134210272 [+]
Database links
  • ENTREZGENE: 100314254;Mir370

Mature sequence rno-miR-370-5p

Accession MIMAT0017202
Previous IDs rno-miR-370*
Sequence

13 -  

caggucacgucucugcaguuacac

 - 36

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

Mature sequence rno-miR-370-3p

Accession MIMAT0003122
Previous IDs rno-miR-370
Sequence

48 -  

gccugcugggguggaaccuggu

 - 69

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

References

1
PMID:16274478 "Identification of clustered microRNAs using an ab initio prediction method" Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M BMC Bioinformatics. 6:267(2005).
2
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).