Stem-loop sequence fru-mir-124-3

Accession MI0003211
Description Fugu rubripes miR-124-3 stem-loop
Gene family MIPF0000021; mir-124
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-124_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

The miR-124 microRNA precursor is a small non-coding RNA molecule that has been identified in flies (MI0000373), nematode worms (MI0000302), mouse (MI0000150) and human (MI0000443). The mature ~21 nucleotide microRNAs are processed from hairpin precursor sequences by the Dicer enzyme, and in this case originates from the 3' arm. miR-124 has been found to be the most abundant microRNA expressed in neuronal cells. Experiments to alter expression of miR-124 in neural cells did not appear to affect differentiation. However the topic result quite controversial since different reports described also a role for miR-124 during neuronal differentiation.

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Stem-loop
     gag     u        a   ga        uaauu 
gguuu   cucuu guguucac gug  ccuugauu     u
|||||   ||||| |||||||| |||  ||||||||      
ccgaa   gagaa cguaagug cgc  ggaauuaa     c
     -ga     c        g   ac        cauaa 
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Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
Coordinates (FUGU5) Overlapping transcripts
HE602536.1: 5137490-5137572 [-]
intergenic

Mature sequence fru-miR-124

Accession MIMAT0002896
Sequence

52 - 

uaaggcacgcggugaaugccaa

 - 73

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Evidence by similarity; MI0001969