Stem-loop sequence hsa-mir-532

Accession MI0003205
Symbol HGNC:MIR532
Description Homo sapiens miR-532 stem-loop
Gene family MIPF0000113; mir-188
Stem-loop 
c a        cucuccuc  u      a    a   cc  uggca 
 g cuugcuuu        ca gccuug gugu gga  gu     u
 | ||||||||        || |||||| |||| |||  ||     c
 c gagcgaaa        gu cggaac caca ccu  ca     u
u c        ----aaac  u      c    c   cc  uuaau
Get sequence
Deep sequencing
17051 reads, 31 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chrX: 49767754-49767844 [+]
sense
OTTHUMT00000056542 ; CLCN5-001; intron 3
OTTHUMT00000056543 ; CLCN5-002; intron 3
OTTHUMT00000109349 ; CLCN5-005; intron 3
OTTHUMT00000056542 ; CLCN5-001; intron 3
OTTHUMT00000056543 ; CLCN5-002; intron 3
OTTHUMT00000109349 ; CLCN5-005; intron 3
OTTHUMT00000056542 ; CLCN5-001; intron 3
OTTHUMT00000056543 ; CLCN5-002; intron 3
OTTHUMT00000109349 ; CLCN5-005; intron 3
ENST00000376088 ; CLCN5-001; intron 3
ENST00000376091 ; CLCN5-002; intron 3
ENST00000482218 ; CLCN5-005; intron 3
ENST00000450422 ; CLCN5-201; intron 3
ENST00000376088 ; CLCN5-001; intron 3
ENST00000376091 ; CLCN5-002; intron 3
ENST00000482218 ; CLCN5-005; intron 3
ENST00000450422 ; CLCN5-201; intron 3
ENST00000376088 ; CLCN5-001; intron 3
ENST00000376091 ; CLCN5-002; intron 3
ENST00000482218 ; CLCN5-005; intron 3
Clustered miRNAs
< 10kb from hsa-mir-532
hsa-mir-532 chrX: 49767754-49767844 [+]
hsa-mir-188 chrX: 49768109-49768194 [+]
hsa-mir-500a chrX: 49773039-49773122 [+]
hsa-mir-362 chrX: 49773572-49773636 [+]
hsa-mir-501 chrX: 49774330-49774413 [+]
hsa-mir-500b chrX: 49775280-49775358 [+]
Database links

Mature sequence hsa-miR-532-5p

Accession MIMAT0002888
Previous IDs hsa-miR-532
Sequence

20 -  

caugccuugaguguaggaccgu

 - 41

Get sequence
Deep sequencing 15805 reads, 28 experiments
Evidence experimental; PCR [1], cloned [2-3]
Validated targets
Predicted targets

Mature sequence hsa-miR-532-3p

Accession MIMAT0004780
Sequence

57 -  

ccucccacacccaaggcuugca

 - 78

Get sequence
Deep sequencing 1246 reads, 24 experiments
Evidence experimental; cloned [2]
Predicted targets

References

1
"PCR-based expression analysis and identification of microRNAs" Lu DP, Read RL, Humphreys DT, Battah FM, Martin DIK, Rasko JEJ RNAi and Gene Silencing 1:44-49(2005).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
3
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).